Gene Psyc_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0094 
Symbol 
ID3514682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp108765 
End bp110054 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content47% 
IMG OID637668778 
Productrecombination factor protein RarA 
Protein accessionYP_263402 
Protein GI71064675 
COG category[L] Replication, recombination and repair 
COG ID[COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTA ATTTTCATGC TGATACGCCC TTAGCCCAAC GTATGCGTCC GACCACGCTT 
GATACCATCA TTGGCCAAGA GCATTTGTTG GCAGTCGGTG CTCCATTACG GCGCTTGGTG
GAACAAGGAC ACCTGCCCTC TATCATTTTG CATGGGGAAG CAGGTATTGG AAAAACAACC
ATTGCCATGT TGCTTGCCGA TGCCGTTGGC AGACCGTTTC ATGCGTTGTC CGCGCTAAAT
ACTGGGGTTA AACAGTTACG CGAGGTATTA GATAGTAAGG ATTCGCTAAG CTTTGAGTCG
CCTGTAGTAT TTATTGATGA GATACATCGT TTTAATAAAG CGCAGCAAGA TGCCTTACTC
GGTGCAGTTG AGTCTGGCGA TATTACCTTG ATTGGCGCGA CCACTGAAAA CCCTTCTTTT
AGTGTCAATA ATGCGCTGTT ATCACGTTGC CAAGTCTATC GCTTAGAACC ATTGACGCCT
GAGCAAATCA GCGCGGTATT ACAGCGTGCG CTTTTGGAAG ACAATGTTCT TAAGCAACTG
TCCATCGACC TACAAGCACA GCAAACCATC AGCCAATTGG CGCATGGAGA TGCTAGAAAG
TCTCTCAATT TATTGGAGCT AGCGATTCAA ACAGCTGACA CTAAGCAATC ACCGATCATC
ATCGACGATG CATTGGTCGC TCGGGTCGCT CAGACAGCAC TCGTACGCTA TGATAAAGAT
GGTGAGCAGC ATTATGATAT TGTCTCCGCC ATGATAAAGT CTGTGCGTGG CTCAGACCCC
GATGCTGCGC TATATTGGAT GGCACGAATG CTCGTTGGCG GAGAGCCAGC TGATTTTATC
GCGCGGCGCT TGGTGATTTT GGCCAGTGAA GATATCGGTA ATGCCAACCC CAATGCCTTA
CTCCTCGCTG ATGCTGCCCT ACGTAGTGTA CAATCTATCG GCATGCCAGA AGCACGTATT
ATCTTGGGGC AAGTAGTGGT ATATCTGGCA ACCAGCGCAA AAAGCAACAG TACATACAAC
GCTATCAATG CCGCAATGAG CTTAGCAGAA AAGGATGCCT CACCTGTGCC GCTACATTTG
CGTAATGGCG TGACTAAGTT GATGCGTCAG CAAGGCTATG GACAAGATTA TGTCTATCCG
CATAACTATC CTAACCATTA TTATGCGCAA AACTATTTAC CAGATAAGTT GATAGGCACG
CGCTTTTATG AATTTGCGGA CAATCAACGT GAACAGCATA GTAAGCAGTT TGTTGATTGG
TTAAAAAGCC AAGCCGCCAG CAATGACTAA
 
Protein sequence
MPPNFHADTP LAQRMRPTTL DTIIGQEHLL AVGAPLRRLV EQGHLPSIIL HGEAGIGKTT 
IAMLLADAVG RPFHALSALN TGVKQLREVL DSKDSLSFES PVVFIDEIHR FNKAQQDALL
GAVESGDITL IGATTENPSF SVNNALLSRC QVYRLEPLTP EQISAVLQRA LLEDNVLKQL
SIDLQAQQTI SQLAHGDARK SLNLLELAIQ TADTKQSPII IDDALVARVA QTALVRYDKD
GEQHYDIVSA MIKSVRGSDP DAALYWMARM LVGGEPADFI ARRLVILASE DIGNANPNAL
LLADAALRSV QSIGMPEARI ILGQVVVYLA TSAKSNSTYN AINAAMSLAE KDASPVPLHL
RNGVTKLMRQ QGYGQDYVYP HNYPNHYYAQ NYLPDKLIGT RFYEFADNQR EQHSKQFVDW
LKSQAASND