Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0090 |
Symbol | hemD |
ID | 3514678 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 104539 |
End bp | 105522 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637668774 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_263398 |
Protein GI | 71064671 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTATGT CTTGCTCATC ACCTAAGTCC ACGGATTCAA ATCAGCCAAT TGATACGCCA TCATTGCTGC CGCAAGTCGT CATCAATACG CGCCCAGTAG AGCGTGCTGC ACCGCTGACG CGACATTTAC AAGCGGCAGG TATGTCGGTC ATTGATATGC CGATGTTGAC ACTGCAACCG CGTTCAACCA CTGACAATGA TATGATACTG ATGCGCCAAT GGCTAGCAGG CGAGTATCAA GCACTGGTCA TCGTCAGCCC GACAGCGGCA GCCTCAGGTT TGGCTATCTG GCAGTTGCTT GAGCGTGAGC GTCAAGCTAA TGGCGCGACT GATAAAGCAG TAGAGGGCAT AGAAGATAGC TTGGGGGTTT TAGTCGCGCC AAGCCATCTG ATTGCGGTTG GAGAAGCGAC TGCTGCGGTG TTAAATGAGG TGAAATTACC CTTTGCTAGC TATCAAGTAC TGCAGCCTGC TATTGCTAAT AACGAAGGGA TGCTATCGAT GCCTGAGATT GACAGCCTGC AGGCGGGGGA TAAGCTGCTT GTGTGGCGGG GTCTTGGTGG AAGACGATTA TTGGTCGATA CGCTACAGGC GCGCGGAGTT CATATCGATA GTATTGCTTG GTACGAGCGC AAGATACCTG TCGATGCCAT GGCGCAGTAT CAGCAATGGC TACAAGATTT CGATAGTCAG AATGCGATAG GTGGCATAAC CATATCACAG CAAGCAAAAC CCATTGTCAT TGTGAGTAGT GGCACAGCAT TTGAGCATTG GCAAAGTATC GTTCAGGCTA CCAAAACATT AAATTTAGCA GCAGAAAACC AAGCGATGTC AGTCAATGTG ACGCTTGAGC TATCAGACTT TGCTTATGTA GTATTGGGCG AGCGCTTAGC CAATATGGTT GCTGAGCAGC ATTTAAGTTA TTGGCGTGTG GAAGACTTGG CGCCAGAAAC CATTCTTGCT GCTATTAATA CAACGAGCTT ATAA
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Protein sequence | MFMSCSSPKS TDSNQPIDTP SLLPQVVINT RPVERAAPLT RHLQAAGMSV IDMPMLTLQP RSTTDNDMIL MRQWLAGEYQ ALVIVSPTAA ASGLAIWQLL ERERQANGAT DKAVEGIEDS LGVLVAPSHL IAVGEATAAV LNEVKLPFAS YQVLQPAIAN NEGMLSMPEI DSLQAGDKLL VWRGLGGRRL LVDTLQARGV HIDSIAWYER KIPVDAMAQY QQWLQDFDSQ NAIGGITISQ QAKPIVIVSS GTAFEHWQSI VQATKTLNLA AENQAMSVNV TLELSDFAYV VLGERLANMV AEQHLSYWRV EDLAPETILA AINTTSL
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