Gene Psyc_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0086 
SymbolthiC 
ID3514674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp98385 
End bp100460 
Gene Length2076 bp 
Protein Length691 aa 
Translation table11 
GC content47% 
IMG OID637668770 
Productthiamine biosynthesis protein ThiC 
Protein accessionYP_263394 
Protein GI71064667 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0422] Thiamine biosynthesis protein ThiC 
TIGRFAM ID[TIGR00190] thiamine biosynthesis protein ThiC 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTATTT CAGATATTGG TTCACAAGCC TCTACGACTA CTTCGTCAAA AGCGACTGCT 
AAGGCAGACG CGCTAAAAAC CCCCGCCCAT CGTAGCGAAA CTGACGCCCG TTTCGAAGAA
GACGCGCGCG ACTTGCATCG CATCCTTCCT GCCTCTCGTA AAGTCTATAT CGAAGGCTCA
CGCCCCGATA TTCAAGTACC GATGCGTGAG ATTACCCTTG ACCCTACTCC TATCCAAGGC
GTACCTGAAA GCGAGTGGGA GCAAAATCCA CCGTTTTACG TCTATGACAC CTCAGGTGTT
TATACTGATC CCAATACCAC AATTGATTTG ACTAAAGGTT TACCCAAGCT GCGCGAAGAG
TGGATTAAAG AGCGCGGTGA TACGGAACAA TTAAGCGGCT TATCAAGCGA TTATGGACAG
GCACGTGCCC GTGATATCAG CACTGCCAAT CTGCGTTTTG CGCATATTGA TAAGCCGCGC
CGTGCTAAAG CTGTTGATGG GAAAGTAGGT AACGTCACGC AAATGCATTA TGCGCGCCGT
GGTATTATTA CTCCTGAAAT GGAATATATT GCCATCCGCG AAACCCAAAA GCAGCATGAA
TTGACCGATA TGCGCCAGCA CGAAGGCGAG ACTTTTGGTG CGCATACGCC AGCGATTATT
ACCCCTGAAT TTGTACGTAG TGAAGTTGCC GCGGGTCGCG CCATTATTCC GAACAATATT
AACCATCCTG AATCTGAACC GATGATTATC GGGCGTAATT TCTTAGTGAA AATTAACGCC
AATATCGGCA ACTCTGCACT GGGCTCTTCT ATTGATGAAG AAGTGTCAAA AATGACGTGG
GCAACGCGTT GGGGTGCGGA TAACATCATG GATTTATCCA CCGGTAACCA CATCCATGAA
ACCCGTGAAT GGTTGATTCG TAACTCACCT GTACCAATTG GTACTGTACC GATTTATCAA
GCCCTAGAAA AAGTTGATGG CGTTGCCGAA GATTTAACAT GGGAGATATT CCGAGATACC
TTGATTGAGC AAGCCGAGCA AGGCGTTGAT TATTTTACGA TTCATGCCGG TGTATTGCTA
CGCTATGTAC CGTTGACCGC CAATCGCTTG ACCGGTATCG TCTCCCGTGG TGGCTCTATC
ATGGCGCAGT GGTGTTTGGC ACATCATAAA GAAAGCTTTT TATATACCCA TTTTGAAGAC
ATTTGCGAGA TTATGAAGCA GTATGATGTG GCGTTTAGCT TAGGTGATGG TTTGCGTCCG
GGCTGCTTGC AAGACGCTAA TGATGAAGCG CAATTCGGTG AACTGCGTAC CCTCGGCGAG
CTGACCCAAG TCGCATGGAA ACATGACGTA CAAGTCATGA TTGAAGGTCC AGGTCACGTG
GCGATGAATC GTATTAAAGA AAATATGGAC TTGCAGCTTG AGACTTGTGC CGATGCACCT
TTTTATACTC TAGGACCATT AACCACCGAT ATCGCACCCG GTTACGATCA TATTACCAGT
GCCATTGGCG CAGCAATGAT TGGCTGGTTT GGCACTGCGA TGCTGTGTTA CGTGACGCCA
AAAGAGCACT TGGGTTTGCC TAATAAAAAG GATGTCAAGG ACGGCATCAT CACTTATAAA
ATCGCTGCCC ATGCCGCTGA TCTTGCCAAA GGTCATCCCG GTGCGCAGGC ACGTGATAAT
GCGTTATCCA AAGCCCGTTT TGAATTCCGC TGGGATGATC AGTTTAATTT GGCGCTCGAC
CCTGATACCG CGCGCGAGTT CCATGATGAA ACCTTGCCTA AAGACGCGCA CAAGTCAGCA
CACTTTTGCT CCATGTGCGG TCCTAAATTT TGTTCCATGA AAATTACCCA AAACGTACGT
GATTATGCTG CCGGACTAAA AACCTTAGCT GATACAAAAA ACAGCGTGTC CCCACAATCA
GGTGCGCTCA ATGATGCTGA GCATTTGATT AAAAAGGTAG ATACACAGCT GGTCGAGCAA
GTTGGCTCAG CAAGTGCTGA GGAGATTCAT CAAGGGATGG CAGAAATGAC AGAGAAGTAT
CACAAAGAAG GTCGCCAGTT ATATAAAGAA GTATAG
 
Protein sequence
MTISDIGSQA STTTSSKATA KADALKTPAH RSETDARFEE DARDLHRILP ASRKVYIEGS 
RPDIQVPMRE ITLDPTPIQG VPESEWEQNP PFYVYDTSGV YTDPNTTIDL TKGLPKLREE
WIKERGDTEQ LSGLSSDYGQ ARARDISTAN LRFAHIDKPR RAKAVDGKVG NVTQMHYARR
GIITPEMEYI AIRETQKQHE LTDMRQHEGE TFGAHTPAII TPEFVRSEVA AGRAIIPNNI
NHPESEPMII GRNFLVKINA NIGNSALGSS IDEEVSKMTW ATRWGADNIM DLSTGNHIHE
TREWLIRNSP VPIGTVPIYQ ALEKVDGVAE DLTWEIFRDT LIEQAEQGVD YFTIHAGVLL
RYVPLTANRL TGIVSRGGSI MAQWCLAHHK ESFLYTHFED ICEIMKQYDV AFSLGDGLRP
GCLQDANDEA QFGELRTLGE LTQVAWKHDV QVMIEGPGHV AMNRIKENMD LQLETCADAP
FYTLGPLTTD IAPGYDHITS AIGAAMIGWF GTAMLCYVTP KEHLGLPNKK DVKDGIITYK
IAAHAADLAK GHPGAQARDN ALSKARFEFR WDDQFNLALD PDTAREFHDE TLPKDAHKSA
HFCSMCGPKF CSMKITQNVR DYAAGLKTLA DTKNSVSPQS GALNDAEHLI KKVDTQLVEQ
VGSASAEEIH QGMAEMTEKY HKEGRQLYKE V