Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0083 |
Symbol | |
ID | 3514671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 94165 |
End bp | 96078 |
Gene Length | 1914 bp |
Protein Length | 637 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637668767 |
Product | eflux ABC transporter inner membrane protein |
Protein accession | YP_263391 |
Protein GI | 71064664 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACTC TATTTCACTT TTTTGAAAAT CGCCTACCTG CCTTCCCTGA AACACCGATG CCGCTACCCT CACCTCGTGA TGGTATGCTG AAATTTTTGT GGGCATGTAC TAACGGTCTA CGCGGCTGGC TACTGCTGTT TATGATTTTG TCAGCGGGTA TTGGTATTTA CGAAGCCATG CTCTTTGCTT GGATTGGTAA TATCGTCGAT TGGCTTGGGG TTTATACGCC GGAAAATCTG TGGCTAGAAA AAGGCGACAT GCTGCTACTC ATGCTGGCGG TGATGATCGT CAGCCCATTA TGGATTGCCT TGTCATCGTT TATCCATTTT CAGACCTTGC AAGGGGTATT CCCTATGCAG ATGCGCTGGC GTTTTCATCA GCGCATGCTT GGACAATCGA TGCAGTTTTA TCAAGATGAG TTTTCTGGTC GTGTCTCAGC AAAGGTAATG CAAACGGCAT TGGCAGTACG TGATACCGTT ATGACAGTTA CCGACATGTT TATGTATGTC GCAGTCTATT TTATCACCTC AGGCATTATT CTCTTTAATC TTGATAGTCT ATTATTAATA CCCTTTATCG CGTGGTTTGT ACTGGTTTGT CTCGCAATGT GGTTTTTTAT TCCTAAGCTC AAACAGACAG CTATCGTACA AGCGGATGCT CGCGCCTTGA TGACGGGGCG CATCACTGAT GCTTACGCCA ATATTATGAC CGTCAAGCTG TTCAGCCACT CGCGCCGTGA GCTCAGTTAC GCCAAAAACG CTATGGGGCA GTTTTTGGGT ACCGTCCATG CACAGATGCG CTGGGTCAGC TATCTTGAAT TTTCAACGCA TTTGATTAGT GTTGTTTTGG TCAGTAGTAC TGCTGGTATT GGCTTGTATT TATGGCAACA AGACGCGATT GGTGTCGGTG CTATTGCCGC TGCAACCGCC ATGGCACTAC GCTTAAATGG TTTAACGCGC TGGATAATGT GGGAGACAGC AAGTTTGTTT GAAAGTATCG GTACGGTACA AGATGGCATG CATACTTTAT CTGCACCGCA AATGATTACT GATAAGCCAA ATGCACCTGC GTTAGATGTC ACTAATGGAC GTATTGTCTT CGACAATGTT AATTTTAGTT ATGAAAATAA TGATGATAAC GAGGCTAGCA ATAGCAATGA TATCAATGGC TATTGCATCA ATAACGCCAG TATCTCTACC ATAAAGCTGC TTGACAACTT TTATCTAGAC ATCAAACCGG GCGAAAAAAT CGGTCTGGTT GGGCGCTCAG GTGCCGGTAA ATCCACTTTG GTCAATCTGC TACTGCGCTT TTTTGATGTC GATGGCGGTA AGATTTTTAT TGATGGGCAA GCGATTGATG AAGTTACCCA AGAATCATTA CGTCAGCAAA TCGGTATGGT CACCCAGGAT ACCTCTTTAT TACATCGTAC CGTGCGCGAA AACATCGCTT ATGGTCGTCC GGATGCCACT GATGAGGAGA TTGTCATCGC GGCAAAACAA GCCCAAGCAT GGGACTTTAT CAAAGACTTA TATGATGATA AAGGCAATAC TGGACTTGAT ACCCAAGTTG GTGAACGCGG CGTCAAACTT TCTGGTGGTC AACGTCAGCG TATTGCCATC TCTCGTGTTA TGCTAAAAAA CGCGCCGATT TTATTATTAG ATGAAGCCAC CAGCGCTCTT GACTCTGAGA TTGAATTTGC AATTACTGAA AGCTTAAACG ATATTATGAC TGGCAAGACG GTTATTGCTA TCGCCCATCG CTTATCAACC ATTGCTGCTC TTGATAGACT GGTGGTGATG GATAAAGGTC AAATCATTGA GCAAGGCAGT CATGACGAGC TATTGAATCT ACATGGCGTC TATGCACGCT TGTGGCATCG TCAAAGCGGT GGCTTCTTAG GTGAAGACAG TTAA
|
Protein sequence | MNTLFHFFEN RLPAFPETPM PLPSPRDGML KFLWACTNGL RGWLLLFMIL SAGIGIYEAM LFAWIGNIVD WLGVYTPENL WLEKGDMLLL MLAVMIVSPL WIALSSFIHF QTLQGVFPMQ MRWRFHQRML GQSMQFYQDE FSGRVSAKVM QTALAVRDTV MTVTDMFMYV AVYFITSGII LFNLDSLLLI PFIAWFVLVC LAMWFFIPKL KQTAIVQADA RALMTGRITD AYANIMTVKL FSHSRRELSY AKNAMGQFLG TVHAQMRWVS YLEFSTHLIS VVLVSSTAGI GLYLWQQDAI GVGAIAAATA MALRLNGLTR WIMWETASLF ESIGTVQDGM HTLSAPQMIT DKPNAPALDV TNGRIVFDNV NFSYENNDDN EASNSNDING YCINNASIST IKLLDNFYLD IKPGEKIGLV GRSGAGKSTL VNLLLRFFDV DGGKIFIDGQ AIDEVTQESL RQQIGMVTQD TSLLHRTVRE NIAYGRPDAT DEEIVIAAKQ AQAWDFIKDL YDDKGNTGLD TQVGERGVKL SGGQRQRIAI SRVMLKNAPI LLLDEATSAL DSEIEFAITE SLNDIMTGKT VIAIAHRLST IAALDRLVVM DKGQIIEQGS HDELLNLHGV YARLWHRQSG GFLGEDS
|
| |