Gene Psyc_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0069 
SymbolinfB 
ID3514157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp77646 
End bp80372 
Gene Length2727 bp 
Protein Length908 aa 
Translation table11 
GC content46% 
IMG OID637668753 
Producttranslation initiation factor IF-2 
Protein accessionYP_263377 
Protein GI71064650 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00487] translation initiation factor IF-2
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00377162 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGATA AGACCGTCAA AGAACTGGCA GATATGGTAA GCAAAACCGC AAGTGCTGTA 
CAACAGCAAC TGGTAGATGC TGGACTGCCT GCGCGCGCAG AGGGTGACCT AGTCACCGAG
CTTGAGCAGG AGAAGTTGGT GACGTATTTA AAGCAAAGTC ATGGTCAGGA AGAAAAGCGT
CGTATTAGTC TGAAGTCTAA GACGACTAGC ACCGCGCGTG TGACTGGCTC TTCGGGAAAA
TCTAAGAGCG TCAATGTTGA AGTGCGTAAA AAGAAAGTAT TTGAAAAGCC TGATCCAGAA
AAGATGGCTG AAGAATTGGC TGCACGTGAG CAAGCGATGA TTGAGTCGCA AGCGCGTGCT
GCTAAAGATG CTGAAGACCG TGCTGCTACT AAGAAAAAAT CTGAAGAACG TCAAGCAGCT
ACCTTAGCCG CGATGCGTGC AAGCCTCGGC TCTAGCAAAA AATCAGACGA TAAGAACGAT
GATATCTCAA CGTCAGTGGT TGTGAAAAAA GGCGGTAAGA CTACTATTGA GGTCAAACCA
AAAGAACAAC CTAAGAAGAA AGTTGCTGCG ACGAAACCAA AAGTTGAGAC GGCAGTTGAG
CGTAAAGCTC GCGAAGTGCG TGAAAAAGAA GAAGCTCGTT TACGCGAGAT CGAAACAGAA
ACACGCCGTA CCCAAGCTGA AGAAGCGCAA AAGCGCACGC TTGAGCAAAT GCGTAAAATG
GCCGGTCAAT ATACGGATCA GCCAGCGACT GAAGTTCGTA AAGATGAGCC ATTGGCAGAA
GGTTTAGTCG GTGACGCATT AGAAGAATCG TTTGAGAAAG AACGTCGTGA AATCAAGCGT
GGCACAAGTA GCACTACTGC CCGTGGTCGT GGTCGACGTA AGAATCAAGA CGAGCGCGAA
ATTAAAAACC GTAAAAATGG TTTGCGTTCA AGTCAGTCAG CACAGCATAA GTTTGAAAAA
CCTGTAGAAA AAATCGTTTA TGATGTAGAA ATTAGTGAGC AAATCACGGT TTCTGATCTT
GCCCAGCGTA TGGCAGTGAA AGCTCGTGAA GTGACTAAGT TACTCATGAA AATGGGCGAA
ATTGCTCGTG AATCAGATAC GATTGATCAA GCAACTGCTA GTCTAATCGT AGAAGAGATG
GGTCACAATC CAGTACCTGT GAGTGATACT AAGGTTGAAG ACGATCTACA AGATGCGGCT
GATGAGCGCA GCAGTAACGT ACAAACGCGT CCACCAGTTG TTACTATTAT GGGTCACGTT
GACCATGGTA AGACGTCATT ATTAGATAAA ATCCGTGAAA CGAAAGTGGC TACGGGTGAA
GCGGGTGGTA TTACTCAGCA TATCGGTGCT TATCATGTGA AAACAGCACG TGGTGTCATT
ACTTTCCTTG ATACCCCAGG TCACGCCGCC TTTAGTGCAA TGCGTTCACG TGGTGCTCAA
GCGACGGATA TCGTTGTACT GGTCGTCGCT GCTGATGACG GCATGATGCC ACAAACTGAA
GAAGCGATTG ATCATGCCCG CGCTGCTGGT ACGCCGCTGA TTGTTGCAAT CAACAAAATG
GATAAGCCAA GTGCTGATCC TGATCGTGTT CTTAACGAAT TGACTGCAAA AGAAGTGGTA
TCAGAAGAAT GGGGCGGTGA TACCCCAATG GCTCGTATCT CAGCCAAAAC AGGTGATGGT
ATTGATGAGC TGCTAGAGCT TATTAGCTTG CAAGCTGAGT TAATGGAATT AGAAGCACCA
TTAGATGGTC CTGCTCAAGG TGTGGTTATT GAGTCAAGAC TGGAAAAAGG TCGTGGTCCT
GTCGTTAGTG TCCTTGTCAA AAAAGGTACA TTGAAACAAG GTGATTTAGT TTTAGCCGGT
GAACATTACG GTAAAGTCCG TGCAATGACC GATGAGCATG GTCAACGTAT TCAGTCAGCT
GGACCATCTA TCCCTGTAGA GATTTTAGGG TTACCTGAAA CGCCAGCAGC TGGTAGTGAA
TTCTTAGTCT TAACCGATGA GAAAAAAGCC CGTGAAGTTG CAGACTTTAG AACCAACCGT
GAGCGCGAGC GTCAGCTTGA GCGTCAAAAC GCGATGCGTC TAGAGAGCAT GTTTGATCAA
ATGGAACAAG GCAATGTTTC ATACTTAAAT ATCGTTCTAA AAACCGATGT TCGCGGCTCG
CTTGAAGCGT TACTGTCAGC ACTGAATGAG TTATCAACTG ATGAAGTTAA AGTCAGAGTG
ATTAGCTCAG GCGTTGGTCC TATCTCTGAG TCAGATGTGA CGCTAGCAGA ATCTAGTGAA
GCGGTATTGT TAGGCTTTAA CGTTCGTGCA GATGCCACCG CACGCCGTAA ATCGGACACA
GCCAACATGG ATATTCGCTA TTACAGTGTT ATTTATGGCT TAATTGATGA TGTGAAAGCG
GCCATGAGTG GTATGCTTGC GCCAGAACAT CGTGAGAAAA TCTTGGGTGT TGCAGACGTT
CGTGAAGTAT TCCGCTCTAG TAAGTTTGGT GCAGCTGCCG GTTGTATGGT GGTTGAAGGT
ACGATTTATC GCAACAAACC TATCCGTGTA TTACGTAATG ACCAAGTTAT CTTTACCGGT
CAATTGCAAT CATTACGTCG CTACAAAGAA GACGTTAATG AAGTACGTAC CGGTATGGAA
TGTGGTCTAG CCGTTCGCGG TTATGATGTA GAAGCTGGTG ATAAAATCGA AGTCTTTGAA
ATCCAAGAGT TCGCACGTAC TATCTAA
 
Protein sequence
MADKTVKELA DMVSKTASAV QQQLVDAGLP ARAEGDLVTE LEQEKLVTYL KQSHGQEEKR 
RISLKSKTTS TARVTGSSGK SKSVNVEVRK KKVFEKPDPE KMAEELAARE QAMIESQARA
AKDAEDRAAT KKKSEERQAA TLAAMRASLG SSKKSDDKND DISTSVVVKK GGKTTIEVKP
KEQPKKKVAA TKPKVETAVE RKAREVREKE EARLREIETE TRRTQAEEAQ KRTLEQMRKM
AGQYTDQPAT EVRKDEPLAE GLVGDALEES FEKERREIKR GTSSTTARGR GRRKNQDERE
IKNRKNGLRS SQSAQHKFEK PVEKIVYDVE ISEQITVSDL AQRMAVKARE VTKLLMKMGE
IARESDTIDQ ATASLIVEEM GHNPVPVSDT KVEDDLQDAA DERSSNVQTR PPVVTIMGHV
DHGKTSLLDK IRETKVATGE AGGITQHIGA YHVKTARGVI TFLDTPGHAA FSAMRSRGAQ
ATDIVVLVVA ADDGMMPQTE EAIDHARAAG TPLIVAINKM DKPSADPDRV LNELTAKEVV
SEEWGGDTPM ARISAKTGDG IDELLELISL QAELMELEAP LDGPAQGVVI ESRLEKGRGP
VVSVLVKKGT LKQGDLVLAG EHYGKVRAMT DEHGQRIQSA GPSIPVEILG LPETPAAGSE
FLVLTDEKKA REVADFRTNR ERERQLERQN AMRLESMFDQ MEQGNVSYLN IVLKTDVRGS
LEALLSALNE LSTDEVKVRV ISSGVGPISE SDVTLAESSE AVLLGFNVRA DATARRKSDT
ANMDIRYYSV IYGLIDDVKA AMSGMLAPEH REKILGVADV REVFRSSKFG AAAGCMVVEG
TIYRNKPIRV LRNDQVIFTG QLQSLRRYKE DVNEVRTGME CGLAVRGYDV EAGDKIEVFE
IQEFARTI