Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0069 |
Symbol | infB |
ID | 3514157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 77646 |
End bp | 80372 |
Gene Length | 2727 bp |
Protein Length | 908 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637668753 |
Product | translation initiation factor IF-2 |
Protein accession | YP_263377 |
Protein GI | 71064650 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0532] Translation initiation factor 2 (IF-2; GTPase) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00487] translation initiation factor IF-2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00377162 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGATA AGACCGTCAA AGAACTGGCA GATATGGTAA GCAAAACCGC AAGTGCTGTA CAACAGCAAC TGGTAGATGC TGGACTGCCT GCGCGCGCAG AGGGTGACCT AGTCACCGAG CTTGAGCAGG AGAAGTTGGT GACGTATTTA AAGCAAAGTC ATGGTCAGGA AGAAAAGCGT CGTATTAGTC TGAAGTCTAA GACGACTAGC ACCGCGCGTG TGACTGGCTC TTCGGGAAAA TCTAAGAGCG TCAATGTTGA AGTGCGTAAA AAGAAAGTAT TTGAAAAGCC TGATCCAGAA AAGATGGCTG AAGAATTGGC TGCACGTGAG CAAGCGATGA TTGAGTCGCA AGCGCGTGCT GCTAAAGATG CTGAAGACCG TGCTGCTACT AAGAAAAAAT CTGAAGAACG TCAAGCAGCT ACCTTAGCCG CGATGCGTGC AAGCCTCGGC TCTAGCAAAA AATCAGACGA TAAGAACGAT GATATCTCAA CGTCAGTGGT TGTGAAAAAA GGCGGTAAGA CTACTATTGA GGTCAAACCA AAAGAACAAC CTAAGAAGAA AGTTGCTGCG ACGAAACCAA AAGTTGAGAC GGCAGTTGAG CGTAAAGCTC GCGAAGTGCG TGAAAAAGAA GAAGCTCGTT TACGCGAGAT CGAAACAGAA ACACGCCGTA CCCAAGCTGA AGAAGCGCAA AAGCGCACGC TTGAGCAAAT GCGTAAAATG GCCGGTCAAT ATACGGATCA GCCAGCGACT GAAGTTCGTA AAGATGAGCC ATTGGCAGAA GGTTTAGTCG GTGACGCATT AGAAGAATCG TTTGAGAAAG AACGTCGTGA AATCAAGCGT GGCACAAGTA GCACTACTGC CCGTGGTCGT GGTCGACGTA AGAATCAAGA CGAGCGCGAA ATTAAAAACC GTAAAAATGG TTTGCGTTCA AGTCAGTCAG CACAGCATAA GTTTGAAAAA CCTGTAGAAA AAATCGTTTA TGATGTAGAA ATTAGTGAGC AAATCACGGT TTCTGATCTT GCCCAGCGTA TGGCAGTGAA AGCTCGTGAA GTGACTAAGT TACTCATGAA AATGGGCGAA ATTGCTCGTG AATCAGATAC GATTGATCAA GCAACTGCTA GTCTAATCGT AGAAGAGATG GGTCACAATC CAGTACCTGT GAGTGATACT AAGGTTGAAG ACGATCTACA AGATGCGGCT GATGAGCGCA GCAGTAACGT ACAAACGCGT CCACCAGTTG TTACTATTAT GGGTCACGTT GACCATGGTA AGACGTCATT ATTAGATAAA ATCCGTGAAA CGAAAGTGGC TACGGGTGAA GCGGGTGGTA TTACTCAGCA TATCGGTGCT TATCATGTGA AAACAGCACG TGGTGTCATT ACTTTCCTTG ATACCCCAGG TCACGCCGCC TTTAGTGCAA TGCGTTCACG TGGTGCTCAA GCGACGGATA TCGTTGTACT GGTCGTCGCT GCTGATGACG GCATGATGCC ACAAACTGAA GAAGCGATTG ATCATGCCCG CGCTGCTGGT ACGCCGCTGA TTGTTGCAAT CAACAAAATG GATAAGCCAA GTGCTGATCC TGATCGTGTT CTTAACGAAT TGACTGCAAA AGAAGTGGTA TCAGAAGAAT GGGGCGGTGA TACCCCAATG GCTCGTATCT CAGCCAAAAC AGGTGATGGT ATTGATGAGC TGCTAGAGCT TATTAGCTTG CAAGCTGAGT TAATGGAATT AGAAGCACCA TTAGATGGTC CTGCTCAAGG TGTGGTTATT GAGTCAAGAC TGGAAAAAGG TCGTGGTCCT GTCGTTAGTG TCCTTGTCAA AAAAGGTACA TTGAAACAAG GTGATTTAGT TTTAGCCGGT GAACATTACG GTAAAGTCCG TGCAATGACC GATGAGCATG GTCAACGTAT TCAGTCAGCT GGACCATCTA TCCCTGTAGA GATTTTAGGG TTACCTGAAA CGCCAGCAGC TGGTAGTGAA TTCTTAGTCT TAACCGATGA GAAAAAAGCC CGTGAAGTTG CAGACTTTAG AACCAACCGT GAGCGCGAGC GTCAGCTTGA GCGTCAAAAC GCGATGCGTC TAGAGAGCAT GTTTGATCAA ATGGAACAAG GCAATGTTTC ATACTTAAAT ATCGTTCTAA AAACCGATGT TCGCGGCTCG CTTGAAGCGT TACTGTCAGC ACTGAATGAG TTATCAACTG ATGAAGTTAA AGTCAGAGTG ATTAGCTCAG GCGTTGGTCC TATCTCTGAG TCAGATGTGA CGCTAGCAGA ATCTAGTGAA GCGGTATTGT TAGGCTTTAA CGTTCGTGCA GATGCCACCG CACGCCGTAA ATCGGACACA GCCAACATGG ATATTCGCTA TTACAGTGTT ATTTATGGCT TAATTGATGA TGTGAAAGCG GCCATGAGTG GTATGCTTGC GCCAGAACAT CGTGAGAAAA TCTTGGGTGT TGCAGACGTT CGTGAAGTAT TCCGCTCTAG TAAGTTTGGT GCAGCTGCCG GTTGTATGGT GGTTGAAGGT ACGATTTATC GCAACAAACC TATCCGTGTA TTACGTAATG ACCAAGTTAT CTTTACCGGT CAATTGCAAT CATTACGTCG CTACAAAGAA GACGTTAATG AAGTACGTAC CGGTATGGAA TGTGGTCTAG CCGTTCGCGG TTATGATGTA GAAGCTGGTG ATAAAATCGA AGTCTTTGAA ATCCAAGAGT TCGCACGTAC TATCTAA
|
Protein sequence | MADKTVKELA DMVSKTASAV QQQLVDAGLP ARAEGDLVTE LEQEKLVTYL KQSHGQEEKR RISLKSKTTS TARVTGSSGK SKSVNVEVRK KKVFEKPDPE KMAEELAARE QAMIESQARA AKDAEDRAAT KKKSEERQAA TLAAMRASLG SSKKSDDKND DISTSVVVKK GGKTTIEVKP KEQPKKKVAA TKPKVETAVE RKAREVREKE EARLREIETE TRRTQAEEAQ KRTLEQMRKM AGQYTDQPAT EVRKDEPLAE GLVGDALEES FEKERREIKR GTSSTTARGR GRRKNQDERE IKNRKNGLRS SQSAQHKFEK PVEKIVYDVE ISEQITVSDL AQRMAVKARE VTKLLMKMGE IARESDTIDQ ATASLIVEEM GHNPVPVSDT KVEDDLQDAA DERSSNVQTR PPVVTIMGHV DHGKTSLLDK IRETKVATGE AGGITQHIGA YHVKTARGVI TFLDTPGHAA FSAMRSRGAQ ATDIVVLVVA ADDGMMPQTE EAIDHARAAG TPLIVAINKM DKPSADPDRV LNELTAKEVV SEEWGGDTPM ARISAKTGDG IDELLELISL QAELMELEAP LDGPAQGVVI ESRLEKGRGP VVSVLVKKGT LKQGDLVLAG EHYGKVRAMT DEHGQRIQSA GPSIPVEILG LPETPAAGSE FLVLTDEKKA REVADFRTNR ERERQLERQN AMRLESMFDQ MEQGNVSYLN IVLKTDVRGS LEALLSALNE LSTDEVKVRV ISSGVGPISE SDVTLAESSE AVLLGFNVRA DATARRKSDT ANMDIRYYSV IYGLIDDVKA AMSGMLAPEH REKILGVADV REVFRSSKFG AAAGCMVVEG TIYRNKPIRV LRNDQVIFTG QLQSLRRYKE DVNEVRTGME CGLAVRGYDV EAGDKIEVFE IQEFARTI
|
| |