Gene Psyc_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0060 
Symbol 
ID3514625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp66968 
End bp67738 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content49% 
IMG OID637668742 
ProductRNA methyltransferase 
Protein accessionYP_263368 
Protein GI71064641 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID[TIGR00186] rRNA methylase, putative, group 3 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.024169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAC CTACCTATTT TTATGGCATT CATGCCATTG ATGCATTGCT CGAATACCGT 
CCTCTTGATG GGCTGAGTTT GTTTGTGCAG CAAGGGCGCG AGACTGACAG TCATGTCCAA
GCTATTATGG CGCAAGCACG TGATAATGGT ATTAGCATTC AACCAACGCA AAAAGACAAA
CTTACCCAGC TATGTGGTAG CCCGCAACAT CAAGGTGTGG TGCTTAACGC CCGTCCATTA
GGCTTCGCTG ACGAAGGTTT GCTCGATACT CTTGCAGGGC GCGAGGATTG TTTGCTACTG
GTACTAGATC AAATTACCGA CGCCCATAAC TTCGGTGCTT GCTTACGTAC AGCAGTCGCC
ATGGGCGTAG ATGCGGTTAT TTGTCCAAAG CACCATGCAG CAAGCTTGAC CCCAACCGTC
GCCAAAGTAT CAGTCGGCGC GGCTGAGATG ATGCCCATTG TGAGCGTGAC CAATTTAGCA
CGTACGCTGA CAAAGATTAA AAATGCCGGT GTATTTGTGT TTGGCACCGC TTTAAATGCC
GATGCCAAAC CTCTACATAC CGCAGATTTG ACTGGAAAAA TAGCCATTAT TATGGGTTCA
GAGGGCGAGG GGATGCGCCG CCTGACAACA GAAAGCTGTG ATGAGCTGGT TTATATTCCG
ATGTCAGGCA ACGAGCATGG CAACTTACAA AGCTTAAATG TCAGTGTGGC GACTGGTATG
GCTTTGTATG AGATTAATCG GCAGCGAACT TTAGCTGCTG GGCAAGCTTA A
 
Protein sequence
MAKPTYFYGI HAIDALLEYR PLDGLSLFVQ QGRETDSHVQ AIMAQARDNG ISIQPTQKDK 
LTQLCGSPQH QGVVLNARPL GFADEGLLDT LAGREDCLLL VLDQITDAHN FGACLRTAVA
MGVDAVICPK HHAASLTPTV AKVSVGAAEM MPIVSVTNLA RTLTKIKNAG VFVFGTALNA
DAKPLHTADL TGKIAIIMGS EGEGMRRLTT ESCDELVYIP MSGNEHGNLQ SLNVSVATGM
ALYEINRQRT LAAGQA