Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0060 |
Symbol | |
ID | 3514625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 66968 |
End bp | 67738 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637668742 |
Product | RNA methyltransferase |
Protein accession | YP_263368 |
Protein GI | 71064641 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.024169 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC CTACCTATTT TTATGGCATT CATGCCATTG ATGCATTGCT CGAATACCGT CCTCTTGATG GGCTGAGTTT GTTTGTGCAG CAAGGGCGCG AGACTGACAG TCATGTCCAA GCTATTATGG CGCAAGCACG TGATAATGGT ATTAGCATTC AACCAACGCA AAAAGACAAA CTTACCCAGC TATGTGGTAG CCCGCAACAT CAAGGTGTGG TGCTTAACGC CCGTCCATTA GGCTTCGCTG ACGAAGGTTT GCTCGATACT CTTGCAGGGC GCGAGGATTG TTTGCTACTG GTACTAGATC AAATTACCGA CGCCCATAAC TTCGGTGCTT GCTTACGTAC AGCAGTCGCC ATGGGCGTAG ATGCGGTTAT TTGTCCAAAG CACCATGCAG CAAGCTTGAC CCCAACCGTC GCCAAAGTAT CAGTCGGCGC GGCTGAGATG ATGCCCATTG TGAGCGTGAC CAATTTAGCA CGTACGCTGA CAAAGATTAA AAATGCCGGT GTATTTGTGT TTGGCACCGC TTTAAATGCC GATGCCAAAC CTCTACATAC CGCAGATTTG ACTGGAAAAA TAGCCATTAT TATGGGTTCA GAGGGCGAGG GGATGCGCCG CCTGACAACA GAAAGCTGTG ATGAGCTGGT TTATATTCCG ATGTCAGGCA ACGAGCATGG CAACTTACAA AGCTTAAATG TCAGTGTGGC GACTGGTATG GCTTTGTATG AGATTAATCG GCAGCGAACT TTAGCTGCTG GGCAAGCTTA A
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Protein sequence | MAKPTYFYGI HAIDALLEYR PLDGLSLFVQ QGRETDSHVQ AIMAQARDNG ISIQPTQKDK LTQLCGSPQH QGVVLNARPL GFADEGLLDT LAGREDCLLL VLDQITDAHN FGACLRTAVA MGVDAVICPK HHAASLTPTV AKVSVGAAEM MPIVSVTNLA RTLTKIKNAG VFVFGTALNA DAKPLHTADL TGKIAIIMGS EGEGMRRLTT ESCDELVYIP MSGNEHGNLQ SLNVSVATGM ALYEINRQRT LAAGQA
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