Gene Psyc_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0056 
Symbol 
ID3514621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp62796 
End bp63329 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content44% 
IMG OID637668738 
Producthypothetical protein 
Protein accessionYP_263364 
Protein GI71064637 
COG category[L] Replication, recombination and repair 
COG ID[COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) 
TIGRFAM ID[TIGR00250] RNAse H-fold protein YqgF 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGACA GCACTCTTAT AAAAGATAGC AATGATACTG ATACTGATAC TGGCGTTGCT 
GAACCAGCTA TTAAGCCGCA TCTTATCTTA GCCTTAGATT ATGGGGTTAA AAAAATGGGC
ATGGCACTCG GTAATAGCCT GACAGAAACA GCGCGTGCCT TTGATATATT AGCGATGAAT
AATGGTCAAC CTGATTGGGA TAATCTATTA GGTATCATCA AGGTGTGGGG CGTGGCAAAG
GTGGTGGTCG GACTGCCATT AAATATGGAC GGTAGCAGCT CCATGCTATC AAAACGAGCA
CATAAATTTG CCCGTCGTCT AGCACATAGA ATAATGGAAC AGCATCTACC TGTGATCGTA
TCTCTATGCG ATGAGCGATT AACATCCGTC GCAGCGCGTG AGATAGCATG GGAGAATGGC
TGGATTCAAA ATGAGCGCGA CCCGATTGAT GACATCTCTG CTTGTATTTT AATGTCGACC
TACTTTGCTG ATCCTAATAG TAGTATTGCC ATCGACGCCA TCAAAGCAGA TTAA
 
Protein sequence
MVDSTLIKDS NDTDTDTGVA EPAIKPHLIL ALDYGVKKMG MALGNSLTET ARAFDILAMN 
NGQPDWDNLL GIIKVWGVAK VVVGLPLNMD GSSSMLSKRA HKFARRLAHR IMEQHLPVIV
SLCDERLTSV AAREIAWENG WIQNERDPID DISACILMST YFADPNSSIA IDAIKAD