Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0056 |
Symbol | |
ID | 3514621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 62796 |
End bp | 63329 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668738 |
Product | hypothetical protein |
Protein accession | YP_263364 |
Protein GI | 71064637 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0816] Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) |
TIGRFAM ID | [TIGR00250] RNAse H-fold protein YqgF |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACA GCACTCTTAT AAAAGATAGC AATGATACTG ATACTGATAC TGGCGTTGCT GAACCAGCTA TTAAGCCGCA TCTTATCTTA GCCTTAGATT ATGGGGTTAA AAAAATGGGC ATGGCACTCG GTAATAGCCT GACAGAAACA GCGCGTGCCT TTGATATATT AGCGATGAAT AATGGTCAAC CTGATTGGGA TAATCTATTA GGTATCATCA AGGTGTGGGG CGTGGCAAAG GTGGTGGTCG GACTGCCATT AAATATGGAC GGTAGCAGCT CCATGCTATC AAAACGAGCA CATAAATTTG CCCGTCGTCT AGCACATAGA ATAATGGAAC AGCATCTACC TGTGATCGTA TCTCTATGCG ATGAGCGATT AACATCCGTC GCAGCGCGTG AGATAGCATG GGAGAATGGC TGGATTCAAA ATGAGCGCGA CCCGATTGAT GACATCTCTG CTTGTATTTT AATGTCGACC TACTTTGCTG ATCCTAATAG TAGTATTGCC ATCGACGCCA TCAAAGCAGA TTAA
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Protein sequence | MVDSTLIKDS NDTDTDTGVA EPAIKPHLIL ALDYGVKKMG MALGNSLTET ARAFDILAMN NGQPDWDNLL GIIKVWGVAK VVVGLPLNMD GSSSMLSKRA HKFARRLAHR IMEQHLPVIV SLCDERLTSV AAREIAWENG WIQNERDPID DISACILMST YFADPNSSIA IDAIKAD
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