Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0004 |
Symbol | gyrB |
ID | 3514721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 5179 |
End bp | 7794 |
Gene Length | 2616 bp |
Protein Length | 871 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668686 |
Product | DNA gyrase subunit B |
Protein accession | YP_263312 |
Protein GI | 71064585 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0729554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000403413 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGATT CATTACCTAC CGACCACCAG CAACTAACGT CAGACAGCGT AGTTGAGACT ATTGCCGCCG CTGTCGTTCC TGAGGTATTA CCCTCTGATT ATAGCTCGAA AGACATTCGA GTACTGCGCG GACTAGAAGC GGTGCGCGTG CGTCCTGGCA TGTATATTGG TGATACCGAT GATGGTACCG GCTTGCATCA TATGGTCTTT GAGGTGGTAG ATAACTCTAT CGATGAAGCG CTTGCTGGTC ATTGTGATCA AATTGATATC ATTATTCACG AAGATGAATC TGTGAGCGTA ATGGATAATG GTCGTGGTGT CCCTGTCGAT ATTCACCCAG AAGAAGGTGT GTCTGCAGCA CAGGTTATTA TGACGGTACT GCATGCTGGT GGTAAGTTTG ATGACAACAG CTATAAAGTA TCTGGCGGTC TGCATGGTGT TGGCGTTTCT GTCGTTAATG CATTGTCCAA AAAGCTTGAG ATGAATATCT GGCGTGAAGG CTATCATCAT CATCAGACTT ATACTGATGG CGTGCCTGAC AGCGATATTC AGCAAATGGA AGCGACAGAT CAAACAGGCA CACAAATCCG TTTTTACCCT AGCAATGACG TGTTTACTGG TACTATTTTT GAATATGATA TTTTAGCCAA ACGTTTACGT GAGTTGTCAT TTTTAAACTC AGGTGTACGT ATTGTCTTGA CTGATGAGCG TATTGACAAG CGTCATGAGT TTGAGCACAA AGGTGGTTTG TCAGAGTTTG TCAGCTACAT CAATGCTGGG AAAGATGGCA TCAATGATGT GTTCCATTTT ATCAGTAATC AAGAAGATGG TATTAGTGTC GAAGTGGCAC TACAGTGGAC AGACACTTAT AATGAAAAGG TGTTTTGTTT CACCAATAAT ATTCCGCAGC GCGATGGTGG CACGCATTTA TCTGGCTTTC GCTCAGCGTT GACGCGTTGT TTGAATACCT ATATGGATCG CGAAAATCTC TTCAAAAAAG AGAAAGTGGT GGCGACTGGT GATGATGCGC GTGAAGGTTT AACGGCTATC GTATCCGTCA AAGTTCCTGA TCCTAAGTTT TCGAGTCAAA CCAAAGATAA ATTGGTATCA AGTGAAGTGA AATCTGCTGT CGAATCAGCG ATGCACGATA AGTTTAATGA TTATCTGCAA GAGAACCCAA GCGCTGGTAA ATTGATTGCC GGTAAAATTA TTGATGCTGC TCGTGCTCGT GACGCCGCTC GTAAAGCGCG TGAGATGACT CGTCGTAAGA CTACGTTAGA TATCGCAGGT CTGCCGGGTA AATTGGCGGA TTGCCAAGAA AAAGATCCAG CATTGTCAGA GTTGTACATT GTGGAAGGGG ATTCTGCTGG CGGTTCAGCC AAGCAAGGTC GTAGCCGTAA AACGCAGGCA ATTTTACCAC TAAAAGGTAA AATTCTAAAC GTCGAACGCG CGCGTTTTGA CAAGATGTTA TCGTCACAGG AAGTGGGTAA CCTGATTACT GCGCTTGGTT GCGGTATTGG ACCCGATGAA TATAATCCTG ATAAAGTTCG CTATCATAAA ATTATCATCA TGACCGATGC GGACGTTGAT GGCTCACACA TTCGTACGTT GCTACTGACG TTCTTCTTCC GTCAAACGCC TGAATTGATT GAGCGTGGTT ATATTTATAT CGCTCAACCA CCACTTTATA AAGTCAAAAA AGGTCGTCAA GAACTGTATC TAAAAGACGA TGAAGCGCTT AAAGCTTATT TATTATCATC AACGATTGAT AATACTAGGC TGCATATCAG TGCGGATGCG CCGGCGATTA CTGGTCAAGC GTTAGAGACA TTGTTAAACG ACTATAACCA AACCCAGCTA ATCAAAGCGC GTTTGCAGAT TCGTTATCCA GCCGTGTTAT TAGATGCATT GACGCATACG CCGAAACTTA GTACTGATAT GACGTACGAT AAAGATGCGA TGCAAGCTTG GAAAGACACG CTACAAACTC AGCTTGAACA TTTTGGTAGT GACTTAAACC CTGAGATTGA ATTGGTCAAT ATCCATGCAC CGCAGCCAAA AAATATGGAC GCCGCTGCTG CCGATTTATT GGGTATGAAG CCTGTTGTTG AAGTTGAAGA AGGTAATAGT TCTGAAGCGG AAGCACCGTC AATAAAAGCA CAATGGCTGC CACGTATTAC CGTTTATGTG CATCAGTTGG CACATCATTA CTTGCTTGAT GCCAGCTTTA TCAATTCGGG TGAGTATACT AAGCTGCTGC GTTTATCAGC TGAATGGAAT ACCTTGCTTG ATGTAGATGC TTTTATCCGC CGTGAAGCCA CAGCGGGTAC GAGCAAAGAT ATCCCCGTAC GTGACTTTGA TTATTTATGG CAGCAAATGA TGCTTGATGC CCGCCGCGGT CTAGCAATTC AGCGCTATAA AGGGTTGGGC GAGATGAATG CTGATCAGCT TTGGGATACT ACTATGGATC CTGAAAACCG CCGTATGCTG CGCGTCAATA TCGAAGATGC TATTGCAGCG GATCATATGT TCACCTGTTT GATGGGTGAC CATGTAGAGC CGCGTCGTAT CTTTATCGAA GAAAATGCGT TGACGGTTTC TAACTTAGAT ATCTAA
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Protein sequence | MSDSLPTDHQ QLTSDSVVET IAAAVVPEVL PSDYSSKDIR VLRGLEAVRV RPGMYIGDTD DGTGLHHMVF EVVDNSIDEA LAGHCDQIDI IIHEDESVSV MDNGRGVPVD IHPEEGVSAA QVIMTVLHAG GKFDDNSYKV SGGLHGVGVS VVNALSKKLE MNIWREGYHH HQTYTDGVPD SDIQQMEATD QTGTQIRFYP SNDVFTGTIF EYDILAKRLR ELSFLNSGVR IVLTDERIDK RHEFEHKGGL SEFVSYINAG KDGINDVFHF ISNQEDGISV EVALQWTDTY NEKVFCFTNN IPQRDGGTHL SGFRSALTRC LNTYMDRENL FKKEKVVATG DDAREGLTAI VSVKVPDPKF SSQTKDKLVS SEVKSAVESA MHDKFNDYLQ ENPSAGKLIA GKIIDAARAR DAARKAREMT RRKTTLDIAG LPGKLADCQE KDPALSELYI VEGDSAGGSA KQGRSRKTQA ILPLKGKILN VERARFDKML SSQEVGNLIT ALGCGIGPDE YNPDKVRYHK IIIMTDADVD GSHIRTLLLT FFFRQTPELI ERGYIYIAQP PLYKVKKGRQ ELYLKDDEAL KAYLLSSTID NTRLHISADA PAITGQALET LLNDYNQTQL IKARLQIRYP AVLLDALTHT PKLSTDMTYD KDAMQAWKDT LQTQLEHFGS DLNPEIELVN IHAPQPKNMD AAAADLLGMK PVVEVEEGNS SEAEAPSIKA QWLPRITVYV HQLAHHYLLD ASFINSGEYT KLLRLSAEWN TLLDVDAFIR REATAGTSKD IPVRDFDYLW QQMMLDARRG LAIQRYKGLG EMNADQLWDT TMDPENRRML RVNIEDAIAA DHMFTCLMGD HVEPRRIFIE ENALTVSNLD I
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