| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0001 |
|---|
| Symbol | dnaA |
|---|
| ID | 3514718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 520 |
|---|
| End bp | 1965 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637668683 |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_263309 |
|---|
| Protein GI | 71064582 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0593] ATPase involved in DNA replication initiation |
|---|
| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000168448 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000204804 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGATAGACA CAGCAAATAT TTGGGATAAA TGCTTAAACG ACTTACGGTA TCATGTTAAA
GATAACGTGT TTACCATGTG GTTAAGGCCG CTATCCGCTC ATCAAGAAAA TAATAGTTTG
ATTATTCTTG CACCTAATGA TTACTTTGTA ACTTATATTA AAAAGAATCA CTTAGAGGAT
ATTCAGCAGC TGGTTACTAA GCATAGTCAA GGAAGTATTG AGGAAGTTAT TGTACGTGTT
GATAATGCTG GTCGTGATAC CGATGATGGT AGTTCGCTAC AATCAGGATC TTTATTTGCA
GAAGATGCCC TCCCCTCTTC TCCTGCAGAT TATAAATTCG AAACCATCCA TCATAATAAT
GCCAAAGCAG ATATCGACGC CAATATGCGT CATGCAGAAA TGGTTGACTC TGCTGATGCA
AAATCCTTAA GTTATTTAAA TCCTGACTTT ACCTTTGAGA CTTTTGTCAC AGGTAAGTCT
AATAACCTTG CTTATAAGGC TTGTTATGAG CTTGGCAAAC GTCAATCAAA AAACCGTCAT
AACCCTTTAT TTATATATGG ACCTTCGGGT TTGGGAAAAA CGCATTTAAT GCATTCTGTA
GCTCATCGCT ATTTAAAAAA TAATCAGACT TTTTATTATT TCACTTCTGA AAAATTTATT
AATCAATTGG TTTATTCATT AAGAAATAAT AAAATAGAAG ATTTTAAAAA GAAAATTAAA
AAAGTAGATT TATTAATTGT AGATGATATT CATGTACTGG CTGGAAAGAC AAAAAGCAGT
AATGAATTTT TAACATTATT TGCAGATTTT ACCAGCGGTG ATAAACAATT GATTTTGGCT
TCAGATAGGC ATCCATCACA GATGACCGAA TTTGATGAAC GTTTTAGATC ACGTTTTTCT
TGGGGGTTGA CGGTTGCTGT AGATCCACCT GAGATTGATA CACGGGTACA AATTCTACAG
AAAAAAGCAG CATCTTATGG CATGAGCCTT CCTAAAGAAT GTGCGTTATT CATCGCTCAA
AACGTCGTCT CTAACGTGAG ACGTTTAGAA GGTGCATTGA ACCAAGTCTT TGCTAATGCC
AATTTAACAG GCGCTCCAAT CACGCTTGAG ATGGTGCAAT ACGCGCTAAA AGACATCGTT
GCAATGCGCG TACAAGCCGT TAATATGGAT AATATCCGTA AAGTGGTCGC TGAATATTAT
GATGTAACGA TTAAAGATAT GTTGGGACGC AAACGTACGC GTAGTATTGC TAGACCACGC
CAAATAGCGA TGGCACTATC ACGGGAGTTG ACTAGCGAGA GCTTTCCTGA GATTGGACAA
TCCTTTGGTG GACGTGACCA TACGACAGTG ATGCATGCTT GCGACAAGGT CAATGAGCTG
CGAGCAGCAG ACCCAGCGTT TGACAAGGAT TACAAGACGC TAGCATTGAT GTTGCAAGCG
GGTTAG
|
|---|
| Protein sequence | MIDTANIWDK CLNDLRYHVK DNVFTMWLRP LSAHQENNSL IILAPNDYFV TYIKKNHLED
IQQLVTKHSQ GSIEEVIVRV DNAGRDTDDG SSLQSGSLFA EDALPSSPAD YKFETIHHNN
AKADIDANMR HAEMVDSADA KSLSYLNPDF TFETFVTGKS NNLAYKACYE LGKRQSKNRH
NPLFIYGPSG LGKTHLMHSV AHRYLKNNQT FYYFTSEKFI NQLVYSLRNN KIEDFKKKIK
KVDLLIVDDI HVLAGKTKSS NEFLTLFADF TSGDKQLILA SDRHPSQMTE FDERFRSRFS
WGLTVAVDPP EIDTRVQILQ KKAASYGMSL PKECALFIAQ NVVSNVRRLE GALNQVFANA
NLTGAPITLE MVQYALKDIV AMRVQAVNMD NIRKVVAEYY DVTIKDMLGR KRTRSIARPR
QIAMALSREL TSESFPEIGQ SFGGRDHTTV MHACDKVNEL RAADPAFDKD YKTLALMLQA
G
|
|---|
| |