Gene Psyc_0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0001 
SymboldnaA 
ID3514718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp520 
End bp1965 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content38% 
IMG OID637668683 
Productchromosomal replication initiator protein DnaA 
Protein accessionYP_263309 
Protein GI71064582 
COG category[L] Replication, recombination and repair 
COG ID[COG0593] ATPase involved in DNA replication initiation 
TIGRFAM ID[TIGR00362] chromosomal replication initiator protein DnaA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.68448e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.04804e-06 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATAGACA CAGCAAATAT TTGGGATAAA TGCTTAAACG ACTTACGGTA TCATGTTAAA 
GATAACGTGT TTACCATGTG GTTAAGGCCG CTATCCGCTC ATCAAGAAAA TAATAGTTTG
ATTATTCTTG CACCTAATGA TTACTTTGTA ACTTATATTA AAAAGAATCA CTTAGAGGAT
ATTCAGCAGC TGGTTACTAA GCATAGTCAA GGAAGTATTG AGGAAGTTAT TGTACGTGTT
GATAATGCTG GTCGTGATAC CGATGATGGT AGTTCGCTAC AATCAGGATC TTTATTTGCA
GAAGATGCCC TCCCCTCTTC TCCTGCAGAT TATAAATTCG AAACCATCCA TCATAATAAT
GCCAAAGCAG ATATCGACGC CAATATGCGT CATGCAGAAA TGGTTGACTC TGCTGATGCA
AAATCCTTAA GTTATTTAAA TCCTGACTTT ACCTTTGAGA CTTTTGTCAC AGGTAAGTCT
AATAACCTTG CTTATAAGGC TTGTTATGAG CTTGGCAAAC GTCAATCAAA AAACCGTCAT
AACCCTTTAT TTATATATGG ACCTTCGGGT TTGGGAAAAA CGCATTTAAT GCATTCTGTA
GCTCATCGCT ATTTAAAAAA TAATCAGACT TTTTATTATT TCACTTCTGA AAAATTTATT
AATCAATTGG TTTATTCATT AAGAAATAAT AAAATAGAAG ATTTTAAAAA GAAAATTAAA
AAAGTAGATT TATTAATTGT AGATGATATT CATGTACTGG CTGGAAAGAC AAAAAGCAGT
AATGAATTTT TAACATTATT TGCAGATTTT ACCAGCGGTG ATAAACAATT GATTTTGGCT
TCAGATAGGC ATCCATCACA GATGACCGAA TTTGATGAAC GTTTTAGATC ACGTTTTTCT
TGGGGGTTGA CGGTTGCTGT AGATCCACCT GAGATTGATA CACGGGTACA AATTCTACAG
AAAAAAGCAG CATCTTATGG CATGAGCCTT CCTAAAGAAT GTGCGTTATT CATCGCTCAA
AACGTCGTCT CTAACGTGAG ACGTTTAGAA GGTGCATTGA ACCAAGTCTT TGCTAATGCC
AATTTAACAG GCGCTCCAAT CACGCTTGAG ATGGTGCAAT ACGCGCTAAA AGACATCGTT
GCAATGCGCG TACAAGCCGT TAATATGGAT AATATCCGTA AAGTGGTCGC TGAATATTAT
GATGTAACGA TTAAAGATAT GTTGGGACGC AAACGTACGC GTAGTATTGC TAGACCACGC
CAAATAGCGA TGGCACTATC ACGGGAGTTG ACTAGCGAGA GCTTTCCTGA GATTGGACAA
TCCTTTGGTG GACGTGACCA TACGACAGTG ATGCATGCTT GCGACAAGGT CAATGAGCTG
CGAGCAGCAG ACCCAGCGTT TGACAAGGAT TACAAGACGC TAGCATTGAT GTTGCAAGCG
GGTTAG
 
Protein sequence
MIDTANIWDK CLNDLRYHVK DNVFTMWLRP LSAHQENNSL IILAPNDYFV TYIKKNHLED 
IQQLVTKHSQ GSIEEVIVRV DNAGRDTDDG SSLQSGSLFA EDALPSSPAD YKFETIHHNN
AKADIDANMR HAEMVDSADA KSLSYLNPDF TFETFVTGKS NNLAYKACYE LGKRQSKNRH
NPLFIYGPSG LGKTHLMHSV AHRYLKNNQT FYYFTSEKFI NQLVYSLRNN KIEDFKKKIK
KVDLLIVDDI HVLAGKTKSS NEFLTLFADF TSGDKQLILA SDRHPSQMTE FDERFRSRFS
WGLTVAVDPP EIDTRVQILQ KKAASYGMSL PKECALFIAQ NVVSNVRRLE GALNQVFANA
NLTGAPITLE MVQYALKDIV AMRVQAVNMD NIRKVVAEYY DVTIKDMLGR KRTRSIARPR
QIAMALSREL TSESFPEIGQ SFGGRDHTTV MHACDKVNEL RAADPAFDKD YKTLALMLQA
G