| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5134 |
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| Symbol | |
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| ID | 3370692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 6090630 |
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| End bp | 6092321 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637655509 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_238199 |
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| Protein GI | 66048358 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AACGCACGAT CCTGATCGTC GCCCTGGCAA TCGTGACCTA CGTCGGGGTT
CTGAAATGGA ACCAAGACTA TGGCCAGGCT GCCATGCCGA CCCAGAATGT TGCAGCCAGC
ACCACCGCAC CGGGTATTCC GGATACGGCC GCTGGTACTA ATGGTTCTGC AAGTGCCGAT
GTTCCAAGCG CAAACGCTAC TGCCAATACG GCTGCAGCAC CTCTTGAAAC TCCGGCCGTA
GCCAGCAAAG ACCTTATCCA CGTCAAGACC GATGTGCTCG ATCTGGCGAT CGATCCGGTG
GGTGGCGACG TCGTTCAGCT TCGTTTGCCT CTGTACCCGC GTCGTCAGGA TCGTCCTGAC
GTTCCGTTCC AGTTGTTCGA CAACGGTGGC GAGCGTACTT TTCTGGCACA AAGTGGCCTG
ACCGGGACCA ATGGTCCTGA TGCTCGCGCT GCCGGTCGTC CGGTTTACAC CTCCACACAA
AAGACTTATC AACTGGCTGA CGGCCAGGAC ACGATGGTCG TGGATCTGAA ATTCTCGGAA
AACGGCGTCA ATTACATCAA GCGCTTCACG TTCAAGCGCG GTCTGTACGA TCTGGTCATG
ACTTACGTTG TGGATAACCA GAGCGCACAA CCCTGGTCCG GTAATCTGTT CGCGCAATTG
AAGCGCGATG CCAGCTCCGA TCCTTCTTCG ACGACTGCTA CCGGCACTGC TACCTATCTG
GGCGCTGCCC TGTGGACTGC GGCCGAGCCG TACAAGAAAG TGTCGATGAA AGATATCGAC
AAGGGCCAGG TCAAGGAAAC TGTCCAGGGC GGTTGGGTTG CATGGTTGCA GCACTACTTC
GTGACTGCGT GGATTCCGGA TCACAACGCA ACCAACGCCG TTCAGACCCG CAAAGACAGC
CAGGGCAACT ACATCATCGG CTTCACCAGT CCGACTCTGT CGGTTGCACC TGGTGCACAA
GGTGAAACCA GTGCCACCCT GTATGCAGGT CCGAAAAGCC AGGCGGTACT CAAAGAGTTA
TCCCCAGGCC TGGAGCTGAC TGTCGATTAT GGTTTCCTGT GGTTCATTGC CCAGCCTATC
TTCTGGCTGC TGCAACATAT CCACGCCATT CTCGGTAACT GGGGCTGGTC GATCATTGTT
CTGACCATGC TGATCAAAGG CCTGTTCTTC CCGCTCTCCG CAGCCAGCTA CAAGTCGATG
GCACGTATGC GCGCCGTGGC TCCGAAGCTT GCATTGCTGA AAGAGCAGCA TGGCGATGAT
CGTCAGAAGA TGTCCCAGGC AATGATGGAG CTGTACAAGA AAGAGAAGAT CAACCCGCTG
GGTGGATGCT TGCCGATTCT TGTGCAGATG CCGGTTTTCC TTTCGCTGTA CTGGGTACTC
CTGGAAAGCG TGGAAATGCG TCAGGCACCA TGGATCCTGT GGATAACCGA CCTGTCGATC
AAGGACCCGT TCTTTATCCT GCCGATCATC ATGGGCGCGA CCATGTTCAT CCAGCAGCGT
CTGAACCCGA CTCCGCCGGA CCCGATGCAG GCCAAGGTCA TGAAAATGAT GCCGATCATT
TTCACGTTCT TCTTCCTGTG GTTCCCTGCC GGTCTGGTTC TGTACTGGGT TGTGAACAAC
ACCCTGTCGA TCGCTCAGCA GGCTTACATC ACTCGCAAGA TCGAAGCGGC TACCAAGAAA
GCAGCTGTCT GA
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| Protein sequence | MDIKRTILIV ALAIVTYVGV LKWNQDYGQA AMPTQNVAAS TTAPGIPDTA AGTNGSASAD
VPSANATANT AAAPLETPAV ASKDLIHVKT DVLDLAIDPV GGDVVQLRLP LYPRRQDRPD
VPFQLFDNGG ERTFLAQSGL TGTNGPDARA AGRPVYTSTQ KTYQLADGQD TMVVDLKFSE
NGVNYIKRFT FKRGLYDLVM TYVVDNQSAQ PWSGNLFAQL KRDASSDPSS TTATGTATYL
GAALWTAAEP YKKVSMKDID KGQVKETVQG GWVAWLQHYF VTAWIPDHNA TNAVQTRKDS
QGNYIIGFTS PTLSVAPGAQ GETSATLYAG PKSQAVLKEL SPGLELTVDY GFLWFIAQPI
FWLLQHIHAI LGNWGWSIIV LTMLIKGLFF PLSAASYKSM ARMRAVAPKL ALLKEQHGDD
RQKMSQAMME LYKKEKINPL GGCLPILVQM PVFLSLYWVL LESVEMRQAP WILWITDLSI
KDPFFILPII MGATMFIQQR LNPTPPDPMQ AKVMKMMPII FTFFFLWFPA GLVLYWVVNN
TLSIAQQAYI TRKIEAATKK AAV
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