Gene Psyr_5102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_5102 
Symbol 
ID3370660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp6053830 
End bp6054609 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content63% 
IMG OID637655477 
ProductABC transporter 
Protein accessionYP_238167 
Protein GI66048326 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCGC TGGAACGCCT CGCGTGGGCA CCGGAACAGA CGTCAGTCTG CACGCACCAA 
CATTTTGCCT TGAAGGATAT CGACCTGCAG ATCGCCGCAG GCGAGTTCGT CGGCCTGATC
GGACCCAACG GCAGCGGCAA GACCAGCCTG CTGCGTTGCG CATTTCGCTA CAGCCGCCCG
CACAGCGGCA AGGTCGCCAT CAATGCCCGC GATATCTGGT CCTGCAGCTC GCGCTGGTGT
GCCCGGCACG TGGCAGTGGT TGCCCAGGAG TTTCCCGATG CATTCGGCCT GACGCTGCTG
GATGTGGCAA ACATGGGGCG CGCGCCTCAT CAGGGGTTCT TTGCCGCAGA CAGTGACCAC
GACCGCGCAA TTGTACAAAA CGCGCTGAAT GCCGTCGGGC TGGCGGGCTA TGAGCAGCAC
CGGTTCGACA CACTTTCCGG CGGCGAGAAG CAGCGTTGTC TGCTGGCGCG GGCGCTGGTG
CAAGAACCCC GATTGATGGT GTTGGACGAA CCCACCAACC ACCTCGACCC GCGCCATCAA
CTGGAATTGC TCGGGCTGGT CAAACAGCTC GGCATGGCCA CGCTGGCCAG TATCCATGAC
CTGAACCTGG CGGCGGCATT CTGTGATCGC CTGTGTGTCG TTCATCACGG CCGGCTCATT
GCCCAAGGCA CGCCCCGGGA GGTGCTGACC CCGGAAATGC TGCTCAGTGT GTTCGGCGCC
AAGGCGCTGG TCGACAGCCA CCCTCTGCGT GACTACCCAC GCATCACCTG GATACCCTGA
 
Protein sequence
MLALERLAWA PEQTSVCTHQ HFALKDIDLQ IAAGEFVGLI GPNGSGKTSL LRCAFRYSRP 
HSGKVAINAR DIWSCSSRWC ARHVAVVAQE FPDAFGLTLL DVANMGRAPH QGFFAADSDH
DRAIVQNALN AVGLAGYEQH RFDTLSGGEK QRCLLARALV QEPRLMVLDE PTNHLDPRHQ
LELLGLVKQL GMATLASIHD LNLAAAFCDR LCVVHHGRLI AQGTPREVLT PEMLLSVFGA
KALVDSHPLR DYPRITWIP