| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5087 |
|---|
| Symbol | |
|---|
| ID | 3370645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 6035454 |
|---|
| End bp | 6037337 |
|---|
| Gene Length | 1884 bp |
|---|
| Protein Length | 627 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637655462 |
|---|
| Product | acyltransferase 3 |
|---|
| Protein accession | YP_238152 |
|---|
| Protein GI | 66048311 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1835] Predicted acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTTCA GAAAAGACAT CAATGGCCTG CGCGCCATCG CAGTGATCGC GGTACTGCTC
TTCCACTTCC ACCCCGACTG GCTGCCTGGC GGCTTTGCCG GTGTCGACGT GTTTTTCGTG
ATCTCGGGGT ATCTGATCAC CGGGATCATC CTGCGCGGCT TGAGGAGCGG TAAATTCAGG
CTGGCGGCGT TCTACACGTC ACGGGCCAGA CGCATCGTCC CGGCCCTCGC TGCGCTGTGT
TTTGCCTTGC TGCTGCTGGG CTGGTTCGCC CTGCTGCCGC TGGATTACAG TGCGCTGGGC
ACACATGTGG CGAGCAGCCT GGGGTTCGTT TCCAACGTTG TCTATTGGCG TGAGGCAGGG
TATTTCACCG CCAGTGCCCA TGAGAAATGG CTGCTGCACA CCTGGTCGTT GTCAGTGGAA
TGGCAGTTTT ACCTGCTGTA CCCGATTGCG CTGCTGATGC TCAGCCGCTT TGTCGCGCTG
CACAACCTGC GCTGGTGGAT ACTCGGAGCA AGCCTGGCAG GCTTTGTGGT CTGCATACCT
GCCTCCTCAC AATGGCCGGA GGCGGCGTTT TACCTGCTGC CGACCCGCGC CTGGGAGTTG
CTGGCAGGTG GTGTGGCCTG CCTGTTCCCG CTGCAATTGA AGGCCCTGCA GCAGCGCGCT
CTGGAACACA TCGGCCTGAC GCTGATCGTG GCCGGTTTCT TTCTGCTGTC CGTGCAGGAC
ACATGGCCGG GTTATCTGGT GCTGATGCCG GTGCTGGGGA CATTCGCGGT GATCATCGCC
GCGCGCAACG ACTCGCTGCT GACCTGTAAC CCGCTGGCCC AATGGACCGG CACACGGTCG
TACTCGCTGT ACCTGTGGCA TTGGCCGGTG GTGGTGTGGA TGAATGACGC CGGGTTGCTG
GGCGAGACCC GCACGGTGCT GGTGGGCATC GGCGTGGCCG TGACGCTGGG TCTGGTTTCA
TGGCGGCTGA TCGAGCAGCC CGTCAGCAGG CCGTTGTCCG ATCAGCGCAG CAGACGTGCC
ACGTTCGGCG CGCTGATCGC TCTGCTGTTC GTCGGCGGAG CGCTGGTGAG TGCGACTGGC
GGCGCGGTAT CGCCACTGCG CCCGGTCAGT GTTTCAGACA AGGCGCGTTT CATTCAGGAT
TACGCTGATC GTCAGCACAA CCTGTACGAG CCTTACTGGC TGAAATGTGA CGCTTTCTCG
GCCCTGACCC AGCGCGGCCA ATCAGGCATC GACGAAGCCT GCACCCGCAA ACAGGGGGTG
GGCGGCGTGT TCCTGTGGGG TGACTCTCAT GCACAGGCGC TGTCGCTCGG CTTGCGTACC
TTGCTGACGC GCAATACGCC CTTCTATCAG GTCGCCTCGG CCAGTTGCCT TCCCGGTCTG
AGTGACCATC AAGGACGTAC CTCTGCGACC AGCAGGGCCT GTGACTACTC CAACAGAACG
GCCCTGCAGG GCATCGAAAA GCTGCGTCCG GACATCGTGG TCATCGCGCA GAAGGATGGG
CACGACAAGA CTGACTGGAC GCAGATCGCG ACCCGGCTCA AGGGTTTTGG CGTGAAGCAT
ATCGTGCTGA TCGGCCCGGT CCCGCAGTGG AACCCGTCGC TGCCCAGCGT CATCGCCAAC
CGCCATTGGG GGCTGAGCGA ATCGCACATC CGCGATCCGG CTCTGGATCA AAGCATCATG
CTGGTGGATC AGGCGGCCCG CAATTTGGCC GCATCGGCAG GCATCCAGTT CGTGTCGCTG
ATCGACAAAC TGTGCATCGC CGATGCCTGC CTGGTACGCC TGGAAGACAA CCGCTCGCTG
CTGCAGATCG ACTCGGGGCA CTTGAGCGCA GAAGGTTCGC TGTACGTCGT GCGCAACTAT
GTACTGCCGC AATTGGTGAA TTAA
|
|---|
| Protein sequence | MDFRKDINGL RAIAVIAVLL FHFHPDWLPG GFAGVDVFFV ISGYLITGII LRGLRSGKFR
LAAFYTSRAR RIVPALAALC FALLLLGWFA LLPLDYSALG THVASSLGFV SNVVYWREAG
YFTASAHEKW LLHTWSLSVE WQFYLLYPIA LLMLSRFVAL HNLRWWILGA SLAGFVVCIP
ASSQWPEAAF YLLPTRAWEL LAGGVACLFP LQLKALQQRA LEHIGLTLIV AGFFLLSVQD
TWPGYLVLMP VLGTFAVIIA ARNDSLLTCN PLAQWTGTRS YSLYLWHWPV VVWMNDAGLL
GETRTVLVGI GVAVTLGLVS WRLIEQPVSR PLSDQRSRRA TFGALIALLF VGGALVSATG
GAVSPLRPVS VSDKARFIQD YADRQHNLYE PYWLKCDAFS ALTQRGQSGI DEACTRKQGV
GGVFLWGDSH AQALSLGLRT LLTRNTPFYQ VASASCLPGL SDHQGRTSAT SRACDYSNRT
ALQGIEKLRP DIVVIAQKDG HDKTDWTQIA TRLKGFGVKH IVLIGPVPQW NPSLPSVIAN
RHWGLSESHI RDPALDQSIM LVDQAARNLA ASAGIQFVSL IDKLCIADAC LVRLEDNRSL
LQIDSGHLSA EGSLYVVRNY VLPQLVN
|
|---|
| |