| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5056 |
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| Symbol | |
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| ID | 3370614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5998600 |
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| End bp | 6000162 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637655431 |
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| Product | regulatory protein, GntR |
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| Protein accession | YP_238121 |
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| Protein GI | 66048280 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000152055 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.949132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC TCCCCGTTGC GTTTGCGTCC ACCCTCACTG GTATCGCGCT GAACCCGAAT
CAGGGCCTGA GCAAGCAGCT TTATGGGTTG TTGCGCCAGC AGGTCCTCGA TGGGCGTCTG
AGCGGCGGCA CGCGTCTGCC AGCCAGTCGC GATCTGGCGC ATTCACTGGG CATCTCCCGT
AACAGCGTCA TACGCGCCTA TGACCAGCTG TATGCCGAGG GTTTCATCGA AGGACGCGTT
GGCGACGGTA CCTATGTTGC GCAGCTCGCG GAACCAGGCG ATGCGTCTCG GCGTGCGAGC
CGTAAAAAAC TATCCACCAA CTTACCCACA GGTGTATCCA CAGGGTTACG CACAGGTTTG
TCCACAATCG CGGCTGAAAT GCCGTCGGAT GCCTGCTGTG AAGTTATCCA CAGCCCGGCA
CTGGCGCTGC TCGAAAAACA TCATCTGCAT GAACCACCGA CGGGTCAGCC ACGAGCCTTT
CGGGTAGGTG TTCCGGCGTT CGATCTTTTC CCTTTTGCCT TGTGGGGCAA GCTGTATGCC
GCTTTTTGGC GCAAGCCGGA CCTTGCCCAG CTCGGTTATG GGTCGGCAGC GGGAGACTCG
CGGCTACGTG AACTGATTGC AGTCTACCTG CGCTCATCGC GTGGGCTGCA TTGCAGTGCT
GAGCAAATTG TGATCACCAG TGGCGCACAG CATGCGATCA GCCTTTGTGC ACAGTTGCTT
CTTGCCCCGG GCGAGGGCGT TGCCGTGGAG AATCCGGGGT ATCGGGCGGC CGGTCATGCG
TTTGCACTGG CAGGTGCTCG ATTGCACGGC GTGGCTGTGG ATAACGAGGG CATGCGTTGC
GCCGACCTTG AGCAGGCAGA CTGTCGACTG GCCTACGTGA CGCCTTCACA CCAATACCCG
ACCGGCGTGG TGATGAGCCT GGCGCGGCGC CTGGAATTGC TGGCCTGGGC CGAGAGGCAC
AAGGGCTGGA TCGTCGAGGA TGATTACGAC GGTGAGTATC GCTACAGCGG TTCACCCTTG
GCCCCCCTGG CCGCGCTCGA CCGCAACGCG CGAGTGCTGT ACGTCGGGAC GTTTGGCAAA
ATCGCCTTCC CGGCGCTGCG CCTTGGGTAT CTGGTGTTGC CAGAGCCACT GGTGCCGGTG
TTCAGCCAGC GCAAGGCCGT GGACATGCGT CATACCGAAA TAGGGGTTCA GGCGGTCATG
GCGCAATTCA TTGCGTCGGG TCATTTTCAA CGACACATAC GTCGCATGCG CCGTGCGGCG
CTCGGTCGTC GCAATGTGCT GCTGGATAAC TGGCCTGCCG ATATCCCGGG ATGCTCGGCA
ATGCCCCGAG TGGTTGCCGG GCTGCATGTC ATGGTCAAGG TCGACAGCGT GGCGCGCGAG
CAGGCGCTGA TTGCCAAGGC CAATGGCGTC GGTGTCGAAA TGAATGCCCT GAGTGATTAC
TGGCTGCCTG ACTCCACTGA GCCTGTGGAT AACCGCGCCG GGCTGGTACT GGGCTTTGCC
GCAGTGCCCG AGGACGAAAT GCTCGATGCA TTGAACAGGC TGCGCGAGGC CTGGTCCGAG
TAG
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| Protein sequence | MPDLPVAFAS TLTGIALNPN QGLSKQLYGL LRQQVLDGRL SGGTRLPASR DLAHSLGISR
NSVIRAYDQL YAEGFIEGRV GDGTYVAQLA EPGDASRRAS RKKLSTNLPT GVSTGLRTGL
STIAAEMPSD ACCEVIHSPA LALLEKHHLH EPPTGQPRAF RVGVPAFDLF PFALWGKLYA
AFWRKPDLAQ LGYGSAAGDS RLRELIAVYL RSSRGLHCSA EQIVITSGAQ HAISLCAQLL
LAPGEGVAVE NPGYRAAGHA FALAGARLHG VAVDNEGMRC ADLEQADCRL AYVTPSHQYP
TGVVMSLARR LELLAWAERH KGWIVEDDYD GEYRYSGSPL APLAALDRNA RVLYVGTFGK
IAFPALRLGY LVLPEPLVPV FSQRKAVDMR HTEIGVQAVM AQFIASGHFQ RHIRRMRRAA
LGRRNVLLDN WPADIPGCSA MPRVVAGLHV MVKVDSVARE QALIAKANGV GVEMNALSDY
WLPDSTEPVD NRAGLVLGFA AVPEDEMLDA LNRLREAWSE
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