| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4992 |
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| Symbol | |
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| ID | 3370544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5921771 |
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| End bp | 5923126 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637655361 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_238057 |
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| Protein GI | 66048216 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTGCGCTT TCAACTGCTC AGGCATTTAC GTCGAACACG CTTACAACCC GATTCACCGC
CGCTACGAAT ACGACCCGGC CGGTGAACTG AGCCGCACCC TCGACAAACT GCGCGGCGAA
ACCCAGTACG AATACGAAGC CAACGGCCAG CTGCTGGCGC GCAACACCGG TCGAGTGGTC
GACGGCGAAG AGTTCCGCTA CGACGCCGCG GCCAACCGCC TGAACTTCAA CACCAGCCGC
TTCGACCACG TCAAAGACAA TCGCCTCAAA CAGTGGGCGA ACCACGAATA CAAATACGAC
GCCTGGGGCA ACCTGATAGA GAAAACGGTC GGCATCGTGC GCTGGCAGAC CTTCACCTAC
GACTGCGAAA ACCGCTTGGT CAAAACCGAG ACCATGGCCG ACACGCAGGT GGAAAGCACC
AGCAGCTACC AGTACGACAG CCTGGGCCGA AGAGTCGCCA AACAGTCCGA GATCAAAGGC
CAAACCGACC ACAAACGCTT TCTCTGGCAA GGTCTGCGGA TGCTGCGTGA GGAAAGTCCA
GGACAGAGCA GCCTGTATAT CTACGAGCCC GGCAGCTATG CGCCGCTGGC CCGCGTGGAT
GAAAAAGAAG GCGAGGTAGA GAACAAGGTT TATTACTTCC ACACCGACCA GATCGGCACA
CCGCTGGAAA TGACCGACGC CGAAGGGCAG ATCGTCTGGC AGGCCAAATA CAGGGCGTGG
GGCGCGGTGG AAAAGCTGGT GGTGAACGAG GTTGAGCAGA ACCTGCGGTT TCAGGGGCAG
TATTTTGATG CCGAGACAGG GCTGCATTAC AACACGTTTA GGTATTATGA CCCAGAGATT
GGGCGGTTTA TTACGCAGGA TCCGATTGGG TTGTTGGGTG GGTTTAATCT ATACGGCTAT
TGCCGTAACC CTACGGCTTG GATTGATCCG TTAGGGCTGG ATTGGAACTA TTTCCTTTCT
AACGAAGATG GTGCTTATTA TCATGGTCGT GCTTCAGATA AAACGTCGTT GAGCGATGTT
ATGCGTCGTC ACGGTAAAAA TAAGGGTGTC GACGGCGCAA GATTTCGTGC TGGAGACACT
ATTACGCAGG TCACCCCGAA AGGAACAGAT ATTGATACTG TTCGAGGCAT TGAAAACGCA
GGCGTAAGAG AGAAACCTAT ATTAGGTCGA GGAAGCCCAA AAGTCCGTGG GAACACTATT
CAAGGTATTT CTGATGCTAA CCTTGACACT CCCAAGGGCA TAGTCAGAAC GAATGCGGCG
AACAGTTATC TTGAGTCACA TGGTGTGAAC AAGGTTAGTT CGCTACCAAG CCTCGACAAA
CGGCCTCACG GCGGCGTTAA ATCAGCAACC TGCTAA
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| Protein sequence | MCAFNCSGIY VEHAYNPIHR RYEYDPAGEL SRTLDKLRGE TQYEYEANGQ LLARNTGRVV
DGEEFRYDAA ANRLNFNTSR FDHVKDNRLK QWANHEYKYD AWGNLIEKTV GIVRWQTFTY
DCENRLVKTE TMADTQVEST SSYQYDSLGR RVAKQSEIKG QTDHKRFLWQ GLRMLREESP
GQSSLYIYEP GSYAPLARVD EKEGEVENKV YYFHTDQIGT PLEMTDAEGQ IVWQAKYRAW
GAVEKLVVNE VEQNLRFQGQ YFDAETGLHY NTFRYYDPEI GRFITQDPIG LLGGFNLYGY
CRNPTAWIDP LGLDWNYFLS NEDGAYYHGR ASDKTSLSDV MRRHGKNKGV DGARFRAGDT
ITQVTPKGTD IDTVRGIENA GVREKPILGR GSPKVRGNTI QGISDANLDT PKGIVRTNAA
NSYLESHGVN KVSSLPSLDK RPHGGVKSAT C
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