| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4976 |
|---|
| Symbol | |
|---|
| ID | 3370528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5902118 |
|---|
| End bp | 5902672 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637655345 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_238041 |
|---|
| Protein GI | 66048200 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCACAT CACCCCCGCA ACACCTCTAC AACAAAGCCT GGCTATTCGC ATCCCATGCC
CACGTCGGCC AAAAAATGAC AGGCTCGGAC CTTCCTTACA CCACCCACGT AGCGATGGTC
GCCAACGAGT TGATCTTCGC CCATCGCGAA GAATCCGTGG GCATGCTTGA AATTGCTTTG
CCCACAGCGT TGTTGCACGA CGTGCTGGAG GACACGCCGG TGACTCAGGA TGAGTTGGCT
GAAGCATTCG GTGTCGAGGT CGCCTCAGCC GTGGCGTGCC TGAGCAAGAA CCTGATCGTG
CCGTTTTCCG AAGCGCTTTA TTTCGCCGGG ATCGCCAGTC ATTCCAAAGA AGCTGCGTCG
GTCAAGTTGT GTGATCGCAT CACCAATCTT CAGTCAGCGC CGTCCACCTG GAAGAAGGCA
AAGCGAGCGT CTTATCTGGT GGAGTCGGCG CAGATCCTGG CTGCCTTGGG GCATGCGAAC
GGGTATCTAC GGCAGCGGCT CATCGATACG ATGACGCGTT ATGAGGCGCT TTATGTTGAT
GGTTTTGAAG GCTGA
|
|---|
| Protein sequence | MPTSPPQHLY NKAWLFASHA HVGQKMTGSD LPYTTHVAMV ANELIFAHRE ESVGMLEIAL
PTALLHDVLE DTPVTQDELA EAFGVEVASA VACLSKNLIV PFSEALYFAG IASHSKEAAS
VKLCDRITNL QSAPSTWKKA KRASYLVESA QILAALGHAN GYLRQRLIDT MTRYEALYVD
GFEG
|
|---|
| |