| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4964 |
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| Symbol | |
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| ID | 3370516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5887089 |
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| End bp | 5889581 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655333 |
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| Product | OmpA/MotB |
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| Protein accession | YP_238029 |
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| Protein GI | 66048188 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA TCAAATACTA CTTTTTGCGC TACCAGCCCT ACGTTCTAGG GGTCTGCTTT
TTCCTGGCGA TCTTCATCGT CTGGAGCATC GGCCGTGCCC TGGGCTTCAG CTCGATGAAC
AGTCTGCTGA CGGGGATCGG CCTGTTTCTG CTGTTGTCGG CAGCCTATGT GCTGTTGCTG
TACCGAGGTG TATCACAGCA CCAGAACCTG GAAGGCCTGC TGCGTGACGA CGCCGATCAG
GCGGTGCTCA ACGCCAGCCC GGCAGACCGT GAAGAAGTCA GCCTGCTGCG CGAGCGCCTG
CTGCAAAGCC TCGAGCGCCT GCAGAGCAAC AAACCGAACG GCAGCAACTC CAAGGACGCG
CTCTACGCCC TGCCCTGGTA TCTGGTGGTC GGTCAGCCCG CAGCGGGCAA AAGCACCATG
CTCTATCAGT CGGGCCTCAA CTTCCCCTAC GCAGAGCGCG AAGGCGCACG CGTGGCCGGG
TTGGGTGGCA CGCGCAATTG TGACTGGTTC TTCAGTTCGG AAGCCGTGCT GCTGGACACG
GCCGGTCGCT ACATGGACGA TCAGGAAGAA GCCGGCAAAT GGCGCGCTTT TCTGCAATTG
CTGCGTCAGC ACCGCCAGCG CAGACCGCTC AACGGCCTGA TTGTCACCGT CAGCATTCAT
GACATCCTGC AGTCCTCGGT GGAGGACCAG GAGCGCATCG CCAAACGTCT GCGCGAGCGC
ATCCAGGAAA CCCACGCGCT GCTGGAAGTG CGTCTGCCGG TGTATCTGGT GTTCACCAAG
TGCGACCTGG TCCCGGGCTT CGTGCCGTTC TATCGCCAGC TTGACGATGT GGCGCGTGGC
GAAGTGATGG GCAAGACCTT CCCGCACAAG GGCTTCGAGC AAGCCGACTG GGGCCAGCGC
TTCGGTGTGG CGATGGATGA ACTGATCAAT TACTGGAAAC AGATCGCCAA CCAGCAACTG
GTGCTTCAGG ACATCCAGGT CACTCGTCAG GACACCGCGG TGTATCGCTT CCCGCTGGAG
CTGGAAGCCT TGAAACCGCG CCTGCTCCTG TTCGTCGATG CTCTGCTGCG CGCCAACCCG
TATCAAAGCG CCGAGATGCT GCGCGGTTTC TACTTCACCA GCGCACTGGA CGCCGATCAG
CCCGAGATGG GCGGACACAC CCGCCAGGTC ACTGAGCGAT TCCAGCTGGA AAGCGAGCAG
GAAGCTGTCG ATGGCAATGT CCAGCCGCAC CCGCTGTTCA TCAACAGCCT GTTCCGCAAG
GTAATCATCC CCGATCAGCA TCTGGTGGCG CTGTACACCA CCAACCACCG CGAGCGGCGC
CGCAAGGCCG CCTGGATCGG TGGCGCAAGC CTTGTGGCGT TGCTGCTGTG CAGTCTGTGG
GGCTGGTCGT ACTGGAACAA CAAGGACAAC ATCCAGTCCA TCTCCAGCGA ACTCGCTCAG
GCCGCAGCCG AGGACAGCAA GGCCACCGGG CAGTACACCG AGTGGCAAAC GCTGGATCGC
ATGCGCTTCT GGACTTCGCT TTACTACGAT CGTCATCACG ACGAAGGCGT ACCACTGCGC
TTGCGTCTGG GTCTCTACCG GGGCTATGAC GTCGAGCCGC TGCTGCGCAC GCGTTACTTC
AACCGTCTGG AAACGGTGAT GCTCAAACCG ACCGCAGACA ACCTGACGCG CTCGCTTTAC
CTGCTGACCA CCATCAAGGT CTACCAGCGT AATGCCAAGG ACCTGATGCC GGTCACCGGC
GTCGACAGTG TCGAGCCCAA GGCGCTGCCG CCGGATAACC GCGCGCAATC CATCGCCGCC
TTCGGCAAGG CCACGCTGGA CACTTACGTG ATGTTGTCGC GCGCCCAGCG TGAAAAGGCC
GACCCGGCGT TCCTGAAAGC GAAGATGCCT GATTACTGGT ACCCGGCCAT CGCGCGTCAG
ACTGGCAAGA CCATCACCGC GAATGCCGAG GCAGGCTCCA ATCAGGATTA CGAGTACGCC
AGCCGACAGA TCAACTTCTA CAGCGATCAG ATTCACGAGC TGGACGTGCC ACGGATTCTC
GACAACGCAT TTCTGACATC CAGCTCGCGT AATTACATCA ACAGCCTGTT GACGCAGTCG
TTGAAGGCTA TCGAAACGAT CACGCTGGAA TCGGACACGC TGTTTGCCTT TGGTCGTGCC
GATTTCCAGA GCCTTAAAAC CGAAGGTCAA AATCAGTTGA GCGCGATCGC CGGCAAGCTG
TTGAGTACAC CGAACATCGG CAAGATCGTG ATTGCAGGTC ACGCCGACCA GTTGGGCGAC
CCGCAAAGCA ACATGCAGGT GTCCAAACAG CGTGCGCAGA CCATCAAGAC TTACCTGGTC
GGCAAGGGCG TGCCCGCCGA GCTGGTGGAC GCGATCGGTG AAGGCAGCGA GAAGCCTCTG
GTCAAATGCG ACATGCAGCA ACCCAGAGCG CAGTTGATTC AGTGCCTTGA GCCGAATCGA
CGCGTGGAGA TCGAAGTACG CGCGCTCAAT TGA
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| Protein sequence | MNKIKYYFLR YQPYVLGVCF FLAIFIVWSI GRALGFSSMN SLLTGIGLFL LLSAAYVLLL
YRGVSQHQNL EGLLRDDADQ AVLNASPADR EEVSLLRERL LQSLERLQSN KPNGSNSKDA
LYALPWYLVV GQPAAGKSTM LYQSGLNFPY AEREGARVAG LGGTRNCDWF FSSEAVLLDT
AGRYMDDQEE AGKWRAFLQL LRQHRQRRPL NGLIVTVSIH DILQSSVEDQ ERIAKRLRER
IQETHALLEV RLPVYLVFTK CDLVPGFVPF YRQLDDVARG EVMGKTFPHK GFEQADWGQR
FGVAMDELIN YWKQIANQQL VLQDIQVTRQ DTAVYRFPLE LEALKPRLLL FVDALLRANP
YQSAEMLRGF YFTSALDADQ PEMGGHTRQV TERFQLESEQ EAVDGNVQPH PLFINSLFRK
VIIPDQHLVA LYTTNHRERR RKAAWIGGAS LVALLLCSLW GWSYWNNKDN IQSISSELAQ
AAAEDSKATG QYTEWQTLDR MRFWTSLYYD RHHDEGVPLR LRLGLYRGYD VEPLLRTRYF
NRLETVMLKP TADNLTRSLY LLTTIKVYQR NAKDLMPVTG VDSVEPKALP PDNRAQSIAA
FGKATLDTYV MLSRAQREKA DPAFLKAKMP DYWYPAIARQ TGKTITANAE AGSNQDYEYA
SRQINFYSDQ IHELDVPRIL DNAFLTSSSR NYINSLLTQS LKAIETITLE SDTLFAFGRA
DFQSLKTEGQ NQLSAIAGKL LSTPNIGKIV IAGHADQLGD PQSNMQVSKQ RAQTIKTYLV
GKGVPAELVD AIGEGSEKPL VKCDMQQPRA QLIQCLEPNR RVEIEVRALN
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