Gene Psyr_4907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4907 
Symbol 
ID3370458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5819521 
End bp5820867 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content60% 
IMG OID637655275 
ProductPAS 
Protein accessionYP_237972 
Protein GI66048131 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAA ATAAGAACAA AGCTGAGCTG ACGGCCATGA AGGCCCAGGT AGATGGACTC 
AAAGGACTGA CAAGCGCGCT GGAAAAATCG ATGGCGGTGG TCGAGCTGGG TCTCGACGGC
AAGATCCTCC GGGCCAACGA TAACTTCCTC GCGGCGATGG GCTATCGGGC TGAAGAGCTG
GCGACCAAGA CACATCGCGA CTTCTGCGAG CCGGAAATGC TCCGCAGCCG CGAGTATGCG
GATCTCTGGG CATCCTTGAA GGCCGGAAAA TTCATCTCGG GCACCTTCAA ACGCGTCGGC
AAGAATGGCC ACAGCGTCTG GCTCGAAGCC AGCTACAACC CGGTGACGGA TGCGCAGGGC
AACGTCGTCA AGGTGGTCAA GTACGCCCTG GACGTCACCA CACGCGTGAT GCTGGAGAAC
GAAACCAGCA GCAAGCTCGC CGCTGTCGAC CGGGCGATGG CTATCTGCGA ATTCGAACCC
AACGGCAATG TGATAACCGC CAACAACAAC TTCCTGAACG TCATGGGCTA TGCGCTGGCC
GAGATCAAGG GTAAACACCA TCGCTCGTTC TGCGAGCCGA CACTGGTCAA CAGCCCGGAA
TACACCGAGT TCTGGCGCAA GCTGAACCAC GGCGAGTTCA TCGGCGACCA GTTCAAACGT
ATCGGCAAAC AGGGTCGGGT TGTCTGGCTG GAAGCGACGT ATAACCCGGT TTTCGATGTC
GACGGCAAAC TCTACAAAAT CGTCAAGTTC GCCAGCGACA TTACCCAGCG CGTCGAAAAA
CAGGAAGCTG ACGCGCACGG TGCGTCGCGC GCTTATCACA TCTCGGCAGA AACCGAGAAA
GTGGCCGAGC AGGGAACCCT GGTCATTCAG GAAACCGCGC GGGAAATGCG TCAGATCTCC
GAAAACATCG GCGCATCGGC AAAGCTGGTG AGTCAACTGG GTGATCGCTC CGAGCAGATC
ACCGCCATCG TCAACACCAT TCGCGGCATC GCCGATCAGA CCAACCTGCT GGCGCTCAAC
GCGGCCATCG AGGCGGCACG CGCGGGGGAT CAGGGCCGTG GGTTTGCCGT GGTGGCCGAC
GAAGTCAGGC AACTGGCGGG ACGTACCAGC GGCTCGACCA CCGAGATTGC CGAAATGATC
GGCAAGATCC TCGCCGAAAC ACGCGAAGCC GTGGCGAGCA TGGACGCCAC GCAGGAAGGA
GCCATTCGTG GTGTGACACT GGCCGATCAG GCCGGCCAGG TGATCGTGCA GATCCGCGAT
GGCGCAAGCG ATGCAGTCGA GGCCGTCAAC ATGTTCGCCA CACGCATGGA CGAAGCTGAA
GCGTTTGCAA AACCGGGCAA GCGGTGA
 
Protein sequence
MFGNKNKAEL TAMKAQVDGL KGLTSALEKS MAVVELGLDG KILRANDNFL AAMGYRAEEL 
ATKTHRDFCE PEMLRSREYA DLWASLKAGK FISGTFKRVG KNGHSVWLEA SYNPVTDAQG
NVVKVVKYAL DVTTRVMLEN ETSSKLAAVD RAMAICEFEP NGNVITANNN FLNVMGYALA
EIKGKHHRSF CEPTLVNSPE YTEFWRKLNH GEFIGDQFKR IGKQGRVVWL EATYNPVFDV
DGKLYKIVKF ASDITQRVEK QEADAHGASR AYHISAETEK VAEQGTLVIQ ETAREMRQIS
ENIGASAKLV SQLGDRSEQI TAIVNTIRGI ADQTNLLALN AAIEAARAGD QGRGFAVVAD
EVRQLAGRTS GSTTEIAEMI GKILAETREA VASMDATQEG AIRGVTLADQ AGQVIVQIRD
GASDAVEAVN MFATRMDEAE AFAKPGKR