Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4907 |
Symbol | |
ID | 3370458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5819521 |
End bp | 5820867 |
Gene Length | 1347 bp |
Protein Length | 448 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637655275 |
Product | PAS |
Protein accession | YP_237972 |
Protein GI | 66048131 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAA ATAAGAACAA AGCTGAGCTG ACGGCCATGA AGGCCCAGGT AGATGGACTC AAAGGACTGA CAAGCGCGCT GGAAAAATCG ATGGCGGTGG TCGAGCTGGG TCTCGACGGC AAGATCCTCC GGGCCAACGA TAACTTCCTC GCGGCGATGG GCTATCGGGC TGAAGAGCTG GCGACCAAGA CACATCGCGA CTTCTGCGAG CCGGAAATGC TCCGCAGCCG CGAGTATGCG GATCTCTGGG CATCCTTGAA GGCCGGAAAA TTCATCTCGG GCACCTTCAA ACGCGTCGGC AAGAATGGCC ACAGCGTCTG GCTCGAAGCC AGCTACAACC CGGTGACGGA TGCGCAGGGC AACGTCGTCA AGGTGGTCAA GTACGCCCTG GACGTCACCA CACGCGTGAT GCTGGAGAAC GAAACCAGCA GCAAGCTCGC CGCTGTCGAC CGGGCGATGG CTATCTGCGA ATTCGAACCC AACGGCAATG TGATAACCGC CAACAACAAC TTCCTGAACG TCATGGGCTA TGCGCTGGCC GAGATCAAGG GTAAACACCA TCGCTCGTTC TGCGAGCCGA CACTGGTCAA CAGCCCGGAA TACACCGAGT TCTGGCGCAA GCTGAACCAC GGCGAGTTCA TCGGCGACCA GTTCAAACGT ATCGGCAAAC AGGGTCGGGT TGTCTGGCTG GAAGCGACGT ATAACCCGGT TTTCGATGTC GACGGCAAAC TCTACAAAAT CGTCAAGTTC GCCAGCGACA TTACCCAGCG CGTCGAAAAA CAGGAAGCTG ACGCGCACGG TGCGTCGCGC GCTTATCACA TCTCGGCAGA AACCGAGAAA GTGGCCGAGC AGGGAACCCT GGTCATTCAG GAAACCGCGC GGGAAATGCG TCAGATCTCC GAAAACATCG GCGCATCGGC AAAGCTGGTG AGTCAACTGG GTGATCGCTC CGAGCAGATC ACCGCCATCG TCAACACCAT TCGCGGCATC GCCGATCAGA CCAACCTGCT GGCGCTCAAC GCGGCCATCG AGGCGGCACG CGCGGGGGAT CAGGGCCGTG GGTTTGCCGT GGTGGCCGAC GAAGTCAGGC AACTGGCGGG ACGTACCAGC GGCTCGACCA CCGAGATTGC CGAAATGATC GGCAAGATCC TCGCCGAAAC ACGCGAAGCC GTGGCGAGCA TGGACGCCAC GCAGGAAGGA GCCATTCGTG GTGTGACACT GGCCGATCAG GCCGGCCAGG TGATCGTGCA GATCCGCGAT GGCGCAAGCG ATGCAGTCGA GGCCGTCAAC ATGTTCGCCA CACGCATGGA CGAAGCTGAA GCGTTTGCAA AACCGGGCAA GCGGTGA
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Protein sequence | MFGNKNKAEL TAMKAQVDGL KGLTSALEKS MAVVELGLDG KILRANDNFL AAMGYRAEEL ATKTHRDFCE PEMLRSREYA DLWASLKAGK FISGTFKRVG KNGHSVWLEA SYNPVTDAQG NVVKVVKYAL DVTTRVMLEN ETSSKLAAVD RAMAICEFEP NGNVITANNN FLNVMGYALA EIKGKHHRSF CEPTLVNSPE YTEFWRKLNH GEFIGDQFKR IGKQGRVVWL EATYNPVFDV DGKLYKIVKF ASDITQRVEK QEADAHGASR AYHISAETEK VAEQGTLVIQ ETAREMRQIS ENIGASAKLV SQLGDRSEQI TAIVNTIRGI ADQTNLLALN AAIEAARAGD QGRGFAVVAD EVRQLAGRTS GSTTEIAEMI GKILAETREA VASMDATQEG AIRGVTLADQ AGQVIVQIRD GASDAVEAVN MFATRMDEAE AFAKPGKR
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