| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4878 |
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| Symbol | |
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| ID | 3370428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5789629 |
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| End bp | 5790975 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637655245 |
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| Product | outer membrane porin |
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| Protein accession | YP_237943 |
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| Protein GI | 66048102 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.477958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT CCACCCTGGC TTTGGCCGTC ACCGTTGGTG TATTGGCTCA GCAGGCCAGC
GCAGCTGGTT TCCTGGAAGA CAGTAAAGCG TCCGTCAGTT CTCGTACTCT GTATTTCAAT
AACGACCTGC GTGAAGGGTT TCGTGCTTCC GACCAGCGAG AAACCTCTAC CGGTCTGAAA
TTCGACTACC TCTCTGGCTT TACTCAGGGC ACTGTCGGTT TTGGTCTTGA TGCGCAAGCT
GTAATGGGTC TGCATTTGGG TGGCGGTATT GAGCACCATA ATGCCAACAC AGCTAATACC
GTTGTTCCGA CTGATACTGA TGGTTCTTCG GTCAGCGACT GGTCCCGTGT TGGTGCCAAC
GCCAAGATGC GCTTCTCTAA AACTGAATTG AAGGTTGGTA ATGCGCTGGC GCCGAACCTG
CCGATTCTGG TCAGCAACGA TGGTCGTCTG TTGCCTCAGG CCTTTGAAGG CGGCATCCTG
ACCTCCAAGG ATCTGGATAA CGTTACCTTC ACCGCAGGTC AACTGAACAA GTCCATTGGC
CGTGCTTCGA GCAACTGGAC TGACCTGTCC GTTGCTGGTG CTACCCAGAC CGCCGACCAG
TTCCGTTTCG CCGGTGCCGA CTGGAAAGTT ACCAAAGACC TGACCCTGCA GTACTACTAC
GCGAACCTTG AAGACTTCTA CAAGCAACAC TTCCTGGGCC TGGTTCACGT CTACCAGATC
GACAACGACC AGTCTTTCAA GACTGACCTG CGTTATTTCA ACAGCAGCGC TGACGGCAAA
AACAGCGAAG CTGCAGCGGG CTATCGTTTT AACAACAACG GTGGTTACGC CTCACATACC
GGCGAAGTCG ACAACCAGAC CTGGTCTGCC ATGTTCACTT ACGCCTTGGG CGGTCACTCG
TTTATGGTTG GTCACCAGCA AGTGGGTGAC AGCGGCGGCA TGGTCTATCT TGGCCAAGGC
AACGTAGTTG ACGGTCGCGG CCGACCTGAA GGTAACGGCG GTTCGAGCTT CTACCTGTTC
ACTGATTCGA TGATCAACGG GTTCAACCGG GCTGGTGAAA ACACCACCTT CGGTCAGTAC
TCGTATGACT TCGCCAAGGT TGGTGTTCCT GGTCTGAAGG CTGCGATTGC TTACTTGAGC
GGTGATGACA TCCGTGATGT CAATCGCAAT CTGGGTAGTC ACTCCGAGTG GGAGCGTGAT
ATGCGCGTTG ACTACGTAAT TCAGAGTGGT CCGCTCAAAG GCTTCGGTAC AACTGTGCGC
CACGGCAGTT TCCGTGGTGA CTCCGCTACT ACTGCTGATA CCGATCAAAC CCGCATCCTC
TTCAACTACA CCTATAGCTT CATGTAA
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| Protein sequence | MKKSTLALAV TVGVLAQQAS AAGFLEDSKA SVSSRTLYFN NDLREGFRAS DQRETSTGLK
FDYLSGFTQG TVGFGLDAQA VMGLHLGGGI EHHNANTANT VVPTDTDGSS VSDWSRVGAN
AKMRFSKTEL KVGNALAPNL PILVSNDGRL LPQAFEGGIL TSKDLDNVTF TAGQLNKSIG
RASSNWTDLS VAGATQTADQ FRFAGADWKV TKDLTLQYYY ANLEDFYKQH FLGLVHVYQI
DNDQSFKTDL RYFNSSADGK NSEAAAGYRF NNNGGYASHT GEVDNQTWSA MFTYALGGHS
FMVGHQQVGD SGGMVYLGQG NVVDGRGRPE GNGGSSFYLF TDSMINGFNR AGENTTFGQY
SYDFAKVGVP GLKAAIAYLS GDDIRDVNRN LGSHSEWERD MRVDYVIQSG PLKGFGTTVR
HGSFRGDSAT TADTDQTRIL FNYTYSFM
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