Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4850 |
Symbol | |
ID | 3370400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5756826 |
End bp | 5757491 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655217 |
Product | fumarylacetoacetate (FAA) hydrolase |
Protein accession | YP_237915 |
Protein GI | 66048074 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTACC AGCACAAATA TGTCGATGGC ACCAACATTC ACTTCCCGCT GGGTAAAGTG GTCTGCATCG GGCGTAACTA CGCCGAACAC GCCAAGGAAC TGGGCAACGC GGTGCCTACC GAGCCGCTGC TGTTCATGAA GCCCGGCAGC GCGGTGGTTG CGCTGGAGGG TGGCTTCAGC ATCCCGGCAG ACCGCGGTTC GGTGCATTAC GAAGCCGAGA TCGTGGTGTT GATCGGCAAG CCCCTGAGCA AGAACCCTTC GCGCGAAGAA GTACTCGACG CGATCAGCGG CTTTGCGCCT GGTCTGGACC TGACGTTGCG TGATGTCCAG TCGCGTCTGC GTGAGAAAGG CCTGCCGTGG GAGCTGGCCA AGTGTTTTGA CGGCGCTGCG GTGATCCCGC CGTTCGTGCC CGCCGAGACC TTCCCTGATC TGGAGGACAT CGGTATCCGC CTGACCCTCA ATGGCAAGGT GGTTCAGGAC GGCAACAGCA ACATGATGCT CAACCCGATC GTGCCGATGA TCCAGCACAT GGCAGCCAAC TTCTCGCTGC AGGCCGGCGA CCTGATCATG ACCGGCACAC CTGCCGGTGT CGGGCCGTTC GAAGCTGGCG ACCAGATCGC CCTGGAACTG GTCGGGCAGA CGCCGTTCGA GAGCGTCGTC AGGTAA
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Protein sequence | MSYQHKYVDG TNIHFPLGKV VCIGRNYAEH AKELGNAVPT EPLLFMKPGS AVVALEGGFS IPADRGSVHY EAEIVVLIGK PLSKNPSREE VLDAISGFAP GLDLTLRDVQ SRLREKGLPW ELAKCFDGAA VIPPFVPAET FPDLEDIGIR LTLNGKVVQD GNSNMMLNPI VPMIQHMAAN FSLQAGDLIM TGTPAGVGPF EAGDQIALEL VGQTPFESVV R
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