Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4803 |
Symbol | |
ID | 3370353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5693281 |
End bp | 5696445 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637655170 |
Product | heavy metal efflux pump CzcA |
Protein accession | YP_237868 |
Protein GI | 66048027 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3696] Putative silver efflux pump |
TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.791013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00147418 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTTTGAAC GGTTGATTCA ATTCGCGATT GAACAGCGCA TCGTCGTGAT GCTTGCTGTG CTGCTCATGG CTGGGCTGGG CATCGCCAGT TACCAGAAAC TGCCCATCGA TGCGGTCCCC GACATCACCA ACGTACAGGT GCAGATCAAC ACCTCTGCGC CCGGCTTCTC GCCGCTGGAA ACCGAGCAGC GCATCACCTT CGCCATCGAG ACCAACATGG CGGGGCTGCC CGGTTTGCAA CAGACGCGCT CGCTGTCGCG CTCGGGCCTG TCCCAGGTCA CGGTGATTTT CGAGGACGGC ACCGACCTGT TCTTCGCCCG CCAACTGGTG AACGAGCGCC TGCAGATCGC CAAGGACCAG TTGCCGGAAG GCGTCGATAC GATGATGGGG CCGATCTCCA CCGGCCTTGG CGAGATCTTC CTGTGGACAG TCGAGGCTCG TGAGGGCGCG CTGAAAGAAG ACGGCACGCC GTACACGCCG ACCGACCTGC GGGTAATTCA GGACTGGATC ATCAAGCCGC AACTGCGCAA CGTGCCGGGC GTGGCCGAGA TCAACACCAT CGGCGGTTTC GCCAGGCAGT ACCAGATCGC GCCTGATCCG AAAAAACTGG CCGCCTACAA GCTGACGCTC AACGATCTGG TGGCAGCGCT GGAGCGCAAC AACGCCAACG TCGGCGCAGG CTATATAGAA CGCGGCGGCG AGCAGTTACT GATTCGCGCA CCGGGTCAGC TGGGCACCGT GGACGACATC GCCAACATCG TCATCGCCAA TGTGCAGGGC ACGCCGATCA GAATCAGCAG CGTGGCCGAG GTCGGCATCG GCAAGGAAAT GCGCTCCGGC GCAGCCACCG AAAATGGTCG TGAAGTGGTG CTCGGCACCG TGTTCATGCT GATCGGTGAA AACAGCCGGA CGGTCTCGCA GGCGGTGGCC GCCAAACTCG CCGAGATCAA CCGCACCCTG CCACAGGGCG TAGAAGCTGT AACGGTTTAT GACCGCACCA CGCTGGTGGA GAAAGCCATC GCGACGGTCA AGAAGAACCT GATCGAAGGC GCGATTCTGG TCATCGTGAT TCTGTTTCTG TTCCTCGGCA ACATCCGTGC TGCGCTGATC ACCGCCATGG TGATTCCGCT GGCCATGCTG TTCACCTTCA CCGGCATGTT CACCAACAAG GTCAGCGCCA ACCTGATGAG CCTGGGTGCA CTGGACTTCG GCATCATTGT CGATGGCGCG GTGGTGATCG TCGAAAACGC CATTCGCAGA CTGGCGCATG CCCAGCAAAA GCACGGTCGC ATGCTGACCC GCAGCGAGCG TTTCCACGAG GTCTTCGCCG CCGCCAGAGA AGCCCGTCGG CCGCTGATCT TTGGTCAGCT GATCATCATG GTCGTGTACC TGCCGATCTT CGCCCTCACC GGTGTGGAAG GCAAAATGTT CCACCCGATG GCCTTCACCG TGGTCATCGC CCTGCTCGGC GCCATGATTC TTTCGGTGAC CTTCGTGCCT GCCGCCATCG CCATGTTCGT CACCGGCAAG GTCAAGGAAG AAGAAGGCTT TGTGATGCGC ACCGCCCGCC AGCGCTACGC GCCGATACTG AGCTGGGTAC TGGGGCATCG CTCGATAGCG TTCGGCATGG CATTCGTGCT GATCGTGCTG TCCGGCTTCA CCGCCAGCCG CATGGGCAGC GAGTTCATCC CGAGCCTGAG CGAAGGCGAC TTCGCCTTGC AGGCATTACG TGTGCCCGGG ACCAGCCTGA CCCAGTCGGT GGACATGCAG CAGCGTCTGG AAAAAGCCAT CATCGAAAAA GTCCCGGAAG TGCAGCGCGT GTTCGCCCGC ACCGGCACCG CCGAGATCGC CGCCGACCCG ATGCCGCCCA ACATTTCCGA CAGCTACGTG ATGCTCAAGC CACAAAGCGA ATGGCCTGAC CCGGACAAGT CTCGCGAAAC GCTGATCGCC GACCTGCAAA AGGCCGCCGC CAGTGTGCCG GGCAGCAACT ACGAACTGTC CCAGCCGATC CAGTTGCGCT TCAACGAACT GGTTTCCGGA GTGCGTAGCG ATGTGGCAGT AAAGGTCTTC GGCGACGACA TGAACGTGCT GAACCAGACC GCCGCTAAAA TCGCCGCCAC CCTGCAAAAA GTGCCGGGTG CCTCAGAAGT CAAAGTCGAG CAGACCACCG GCCTGCCAGT GCTGACCATC AACATCGACC GCGACAAGGC CGCGCGTTAC GGCCTCAACG TGGCCGACGT GCAGGACGCC ATCGCCATTG CGCTGGGCGG TCGTCAGGCG GGCACGCTGT ATGAGGGCGA CCGCCGCTTC GACATGGTGG TGCGCCTCTC CGAGCAACTG CGAACCGACG TGGACGGGCT TTCCAGCCTG CTTATACCGG TGCCCGCAGT TACAGGCAGC AGTGCTGGCA ATCAGCAGAT CAGCTTCATC GCCCTGTCCC AGGTCGCCAG CCTCGACCTG GTGCTCGGGC CGAACCAGAT CAGCCGCGAG AACGGCAAAC GCGTGGTCAT CGTCAGCGCC AACGTGCGCG GTCGGGATCT CGGCTCGTTT GTCGAAGAAG CGGGCACCAC CATCGACAAC GGCGTGCAGA TCCCGGCCGG CTACTGGACC AGTTGGGGCG GGCAGTTCGA ACAACTGCAA TCGGCCGCCA AACGCCTGCA GATCGTCGTG CCGGTGGCGC TGCTGCTGGT ACTGGCGCTG CTGTTCATGA TGTTCAACAA CCTCAAGGAC GGCCTGCTGG TCTTCACCGG TATCCCGTTC GCCCTGACCG GCGGCGTCAT GGCCCTGTGG CTGCGCGACA TCCCGCTGTC GATCTCCGCA GGCGTGGGCT TCATCGCCCT GTCGGGTGTG GCGGTGCTGA ACGGCCTGGT GATGATCGCC TTCATCCGCA GCCTGCGCGA ACAAGGCCAC TCGCTGCACG ACGCCATCAA CGAAGGCGCC CTCACCCGCC TGCGCCCGGT GCTGATGACC GCACTCGTCG CCTCCCTCGG CTTCATCCCC ATGGCCCTCG CCACCGGGAC TGGCGCCGAA GTACAGCGAC CGCTGGCGAC GGTGGTGATT GGCGGGATTC TGTCGTCGAC GGCGCTGACG TTGTTGGTGT TGCCAGCGTT GTATCAGTGG GCGCATCGGC GGGAGGATGA GGAGGCGGTT GAGGCGTTGA AATAG
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Protein sequence | MFERLIQFAI EQRIVVMLAV LLMAGLGIAS YQKLPIDAVP DITNVQVQIN TSAPGFSPLE TEQRITFAIE TNMAGLPGLQ QTRSLSRSGL SQVTVIFEDG TDLFFARQLV NERLQIAKDQ LPEGVDTMMG PISTGLGEIF LWTVEAREGA LKEDGTPYTP TDLRVIQDWI IKPQLRNVPG VAEINTIGGF ARQYQIAPDP KKLAAYKLTL NDLVAALERN NANVGAGYIE RGGEQLLIRA PGQLGTVDDI ANIVIANVQG TPIRISSVAE VGIGKEMRSG AATENGREVV LGTVFMLIGE NSRTVSQAVA AKLAEINRTL PQGVEAVTVY DRTTLVEKAI ATVKKNLIEG AILVIVILFL FLGNIRAALI TAMVIPLAML FTFTGMFTNK VSANLMSLGA LDFGIIVDGA VVIVENAIRR LAHAQQKHGR MLTRSERFHE VFAAAREARR PLIFGQLIIM VVYLPIFALT GVEGKMFHPM AFTVVIALLG AMILSVTFVP AAIAMFVTGK VKEEEGFVMR TARQRYAPIL SWVLGHRSIA FGMAFVLIVL SGFTASRMGS EFIPSLSEGD FALQALRVPG TSLTQSVDMQ QRLEKAIIEK VPEVQRVFAR TGTAEIAADP MPPNISDSYV MLKPQSEWPD PDKSRETLIA DLQKAAASVP GSNYELSQPI QLRFNELVSG VRSDVAVKVF GDDMNVLNQT AAKIAATLQK VPGASEVKVE QTTGLPVLTI NIDRDKAARY GLNVADVQDA IAIALGGRQA GTLYEGDRRF DMVVRLSEQL RTDVDGLSSL LIPVPAVTGS SAGNQQISFI ALSQVASLDL VLGPNQISRE NGKRVVIVSA NVRGRDLGSF VEEAGTTIDN GVQIPAGYWT SWGGQFEQLQ SAAKRLQIVV PVALLLVLAL LFMMFNNLKD GLLVFTGIPF ALTGGVMALW LRDIPLSISA GVGFIALSGV AVLNGLVMIA FIRSLREQGH SLHDAINEGA LTRLRPVLMT ALVASLGFIP MALATGTGAE VQRPLATVVI GGILSSTALT LLVLPALYQW AHRREDEEAV EALK
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