Gene Psyr_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4787 
Symbol 
ID3370337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5675058 
End bp5676122 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content60% 
IMG OID637655154 
Productfructose-1,6-bisphosphate aldolase 
Protein accessionYP_237852 
Protein GI66048011 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0191] Fructose/tagatose bisphosphate aldolase 
TIGRFAM ID[TIGR00167] ketose-bisphosphate aldolases
[TIGR01521] fructose-bisphosphate aldolase, class II, Calvin cycle subtype 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.111053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTTA TCAGCATGCG CCAGATGTTG GACCACGCAG CCGAATTCGG CTACGGCGTT 
CCAGCCTTCA ACGTAAACAA CCTGGAACAG ATGCGCGCCA TTATGGAAGC GGCCGACAAG
ACCGACTCCC CGGTGATCGT CCAGGCTTCT GCCGGTGCCC GCAAATACGC CGGTGCGCCG
TTTCTGCGTC ACCTGATCCT CGCCGCGATC GAAGAATTCC CGCACATCCC GGTGGTCATG
CACCAGGACC ACGGCACCAG CCCTGACATC TGCCAGCGCT CGATCCAGCT GGGTTTCAGC
TCGGTCATGA TGGACGGCTC GCTGCGTGAA GACGGCAAGT CCCCGGCCGA TTACGACTAC
AACGTCGACG TTACCCGTCG CGTGGTGTCC TTCGCTCACG CCTGCGGCGT TTCCGTGGAA
GGCGAGCTGG GCGTGCTGGG TTCGCTGGAA ACCGGCATGG CCGGTGAAGA AGACGGCGTT
GGTGCGGAAG GCGTTCTGGA TCACAGCCAG ATGCTGACCG ACCCGGAAGA GGCCGCTGAC
TTCGTCAAGC GCACTCAGGT CGATGCCCTG GCCATCGCCA TCGGCACCAG CCACGGCGCT
TACAAGTTCA CCAAGCCGCC TACCGGCGAC ATCCTGGCGA TCGAGCGGAT CAAAGAGATC
CACAAGCGCA TCCCCAATAC TCACCTGGTG ATGCACGGTT CTTCGTCCGT TCCACAGGAA
TGGCTGAAGA TCATCAACGA GTTCGGCGGC GACATCAAAG AAACCTACGG TGTGCCGGTC
GAAGAAATCG TTGAAGGCAT CAAGCACGGC GTGCGCAAGG TCAACATCGA CACCGACCTG
CGTCTGGCGT CGACCGGTGC CATCCGCGAA TTCATGGCCA AAAACCCGAG CGAGTTTGAC
CCGCGCAAGT ACCTGGCCAA GACCGTTTCG GCCATGCGTG ATGTATGTAT CGCTCGTTAC
GAAGCATTCG GCACCGCTGG CAACGCCTCG AAGATCAAGC CGATCTCCCT GGACGCCATG
TTCGAACGCT ACGCGCGTGG CGAACTGGAT GCCAAGGTCA ACTGA
 
Protein sequence
MALISMRQML DHAAEFGYGV PAFNVNNLEQ MRAIMEAADK TDSPVIVQAS AGARKYAGAP 
FLRHLILAAI EEFPHIPVVM HQDHGTSPDI CQRSIQLGFS SVMMDGSLRE DGKSPADYDY
NVDVTRRVVS FAHACGVSVE GELGVLGSLE TGMAGEEDGV GAEGVLDHSQ MLTDPEEAAD
FVKRTQVDAL AIAIGTSHGA YKFTKPPTGD ILAIERIKEI HKRIPNTHLV MHGSSSVPQE
WLKIINEFGG DIKETYGVPV EEIVEGIKHG VRKVNIDTDL RLASTGAIRE FMAKNPSEFD
PRKYLAKTVS AMRDVCIARY EAFGTAGNAS KIKPISLDAM FERYARGELD AKVN