Gene Psyr_4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4782 
Symbol 
ID3370332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5669956 
End bp5672016 
Gene Length2061 bp 
Protein Length686 aa 
Translation table11 
GC content62% 
IMG OID637655149 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_237847 
Protein GI66048006 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.204736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTCG AAGCGATGTT CCAGCCGATC CAGATCGGCA AACTCACCAT CCGCAATCGC 
GTGCTGAGCA CTGCGCACGC TGAGGTCTAC GCCACCGACG GCGGCATGAC CACGGATCGT
TACGTGAAGT ACTACGAGGA GAAAGCCAAG GGCGGTATCG GTCTGGCCAT TTGTGGCGGC
TCTTCAAGCG TGGCCATCGA CAGCCCGCAA GGCTGGTGGA AATCGGTCAA CCTGGCGACC
GACAGAATCA TCCCGCACTT CCAGAACCTC GCCGACGCCA TGCACAAGCA CGGCGCCAAG
ATCATGATCC AGATTACCCA CATGGGCCGT CGCTCGCGTT GGGATGGCGA TCACTGGCCG
ACCCTGCTGT CGCCGTCGGG CATTCGCGAG CCGGTACACC GGGCAACCTG TAAAACCATC
GAGCCGGAAG AAATCTGGCG GGTAATCGGC AACTACGCCA GCGCTGCGGC GCGTGCCAAG
GCCGGTGGTC TGGATGGCGT CGAGTTGTCG GCGGTGCATC AGCACATGAT CGACCAGTTC
TGGAGCCCAC GCGTCAACAA GCGCACCGAT GAATGGGGCG GCAGTTTCGA GAACCGCATG
CGCTTCGGCC TCGAAGTGAT CAAGGCGGTG CGCAAGGAAG TCGGCCCCGA CTTCTGTGTG
GGGTTGCGCA TCTGTGGCGA CGAGTTTCAC CCGGACGGCC TCAGCCACGA GGACATGAAA
CAGATCGCCA GGTATTACGA CGACACCGGC ATGATCGATT TCATCGGCGT GGTGGGCTCG
GGCTGTGACA CCCACAACAC CCTGGCCAAC GTCATTCCGA ACATGAGTTA TCCACCGGAG
CCGTTCCTGC ACCTGGCGGC CGGCATCAAG GAAGTGGTCA AGGCCCCGGT GCTGCATGCG
CAGAACATCA AGGACCCGAA CCAGGCAACG CGAATTCTGG AAGGCGGCTA TGTCGACATG
GTCGGCATGA CCCGCGCGCA CATTGCCGAC CCGCACCTGA TCGCCAAGAT CAAAATGGGC
CAGATCGATC AGATCAAACA GTGCGTCGGT GCCAACTACT GCATCGATCG TCAGTATCAG
GGCCTGGACG TGCTGTGCAT CCAGAACGCC GCGACCTCCC GCGAATACAT GGGCGTGCCG
CACATTATCG AGAAATCCGC CGGGCCGAAG CGCAAGGTCG TGGTGGTCGG TGCCGGTCCT
GCCGGCATGG AAGCGGCGCG GGTCTCCGCC GAACGCGGCC ATGACGTGAC CCTGTTCGAG
AAGAAGGACT TCATCGGCGG GCAGATCACC ACGGCATCGA AGGCACCGCA GCGCGACCAG
ATCGCCGGCA TCACCCGCTG GTTCCAGCTG GAGCTGGCGC GCCTGAAAGT CGACCTGCGT
CTGGGGACCG CAGCGGATGC GGCAACCATT CTCGACCTGC GCCCGGACAT CGTGGTGCTG
GCGGTCGGCG GTCATCCGTT TCTGGAGCAG AACGAACACT GGGGGGCGGC GGAAGGCCTG
GTGGTCAGCA GTTGGGACGT GCTGGACGGC AAGGTGGCGC CAGGCAAGAA CGTGCTGGTC
TACGACACCA TCTGCGAGTT CACCGGCATG TCGGTGGCCG ACTTTCTGGC CGACAAGGGC
TGCCAGGTCG AAATCGTCAC CGATGACATC AAACCGGGCG TAGCGATTGG CGGAACCTCG
TTCCCGACCT ACTACCGCAG CATGTACCCC AAGGAAGTGA TCATGACCGG CGACATGATG
CTGGAAAAGG TCTATCGCGA GGGCGACAAG CTGGTAGCGG TGCTGGAAAA CGAATACACC
GGCGCCAAGG AAGAGCGGGT GGTCGATCAG GTGGTGGTGG AAAACGGTGT GCGTCCGGAC
GAAGCGATCT ACTACGCGCT CAAGGAAGGC TCGCGCAACA AAGGCCAGAT CGACATCGAC
GCGCTGTTCG CCATTCAGCC ACAGCCATCG TTGAGCCAGC CGGGTGACGG TTACCTGCTG
TTTCGTATAG GCGATTGCGT GGCGCAGCGT AATACCCACG CGGCGATCTA TGACGGCTTG
CGGCTGTGTA AGGATTTCTG A
 
Protein sequence
MAFEAMFQPI QIGKLTIRNR VLSTAHAEVY ATDGGMTTDR YVKYYEEKAK GGIGLAICGG 
SSSVAIDSPQ GWWKSVNLAT DRIIPHFQNL ADAMHKHGAK IMIQITHMGR RSRWDGDHWP
TLLSPSGIRE PVHRATCKTI EPEEIWRVIG NYASAAARAK AGGLDGVELS AVHQHMIDQF
WSPRVNKRTD EWGGSFENRM RFGLEVIKAV RKEVGPDFCV GLRICGDEFH PDGLSHEDMK
QIARYYDDTG MIDFIGVVGS GCDTHNTLAN VIPNMSYPPE PFLHLAAGIK EVVKAPVLHA
QNIKDPNQAT RILEGGYVDM VGMTRAHIAD PHLIAKIKMG QIDQIKQCVG ANYCIDRQYQ
GLDVLCIQNA ATSREYMGVP HIIEKSAGPK RKVVVVGAGP AGMEAARVSA ERGHDVTLFE
KKDFIGGQIT TASKAPQRDQ IAGITRWFQL ELARLKVDLR LGTAADAATI LDLRPDIVVL
AVGGHPFLEQ NEHWGAAEGL VVSSWDVLDG KVAPGKNVLV YDTICEFTGM SVADFLADKG
CQVEIVTDDI KPGVAIGGTS FPTYYRSMYP KEVIMTGDMM LEKVYREGDK LVAVLENEYT
GAKEERVVDQ VVVENGVRPD EAIYYALKEG SRNKGQIDID ALFAIQPQPS LSQPGDGYLL
FRIGDCVAQR NTHAAIYDGL RLCKDF