Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4761 |
Symbol | |
ID | 3370311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5636162 |
End bp | 5636974 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655128 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_237826 |
Protein GI | 66047985 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0890871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTGAAT TACCTGAAGT CGAAACCACC CGTCGTGGCA TTGCGCCGCA TCTTGAAGGT CAGCGCGTCA GCCGCGTGAT CGTGCGCGAC AGCCGCTTGC GCTGGCCCAT TCCCGAAGAC CTGGACGTGC GCCTGTCCGG CCAGCGCATC GTGCAGGTGG ACAGGCGCGC CAAGTACCTG CTGATCCAGG CCGAGGTGGG CACCCTGATC AGCCACCTGG GCATGTCCGG CAATCTGCGT CTGGTCGAGG CCGGGCTCCC GGCGCTCAAA CATGAGCATG TCGATATCGA ACTGGAGTCC GGGCTGGCCT TGCGTTACAC CGACCCGCGT CGCTTTGGCG CGATGCTCTG GAGCCTTGAT CCGCATAATC ACGAACTGTT GATCCGCCTG GGGCCGGAGC CGCTGACCGA TCTGTTCGAT GGCGAGCGTC TTTACGAGCG TTCGCGTGGC AAGTCGATCG CTGTCAAGCC GTTCGTCATG GACAACGCCG TTGTGGTCGG GGTGGGCAAT ATCTATGCGA CCGAAGCGCT GTTCGCCGCG GGCATCGACC CGCGCCGCGA AGCAGGGAGT GTGTCCCGGG CGCGTTACCT GAAGCTGGCC ATCGAGATCA AACGCATTCT GGCCTACGCG ATAGAGCGTG GCGGCACCAC CCTGCGTGAC TTCATCGGCG GTGACGGCAA GCCCGGGTAT TTCCAGCAGG AATTGTTTGC ATATGGGCGT GGCGGTCAGC CATGCAAGGT GTGCGGCACG ACGCTGCGTG AGGTCAAACT CGGCCAGCGC GCCAGCGTGT ATTGCCCGAA ATGCCAGCGC TGA
|
Protein sequence | MPELPEVETT RRGIAPHLEG QRVSRVIVRD SRLRWPIPED LDVRLSGQRI VQVDRRAKYL LIQAEVGTLI SHLGMSGNLR LVEAGLPALK HEHVDIELES GLALRYTDPR RFGAMLWSLD PHNHELLIRL GPEPLTDLFD GERLYERSRG KSIAVKPFVM DNAVVVGVGN IYATEALFAA GIDPRREAGS VSRARYLKLA IEIKRILAYA IERGGTTLRD FIGGDGKPGY FQQELFAYGR GGQPCKVCGT TLREVKLGQR ASVYCPKCQR
|
| |