Gene Psyr_4712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4712 
Symbol 
ID3370262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5583431 
End bp5584684 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID637655079 
Productserine hydroxymethyltransferase 
Protein accessionYP_237777 
Protein GI66047936 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAGCA AGCAAGACCA GATCCAGGGT TATGACGATG CACTGTTGTC GGCGATGAAC 
GCCGAGGAGC AGCGTCAGGA AGACCATATC GAGCTGATCG CCTCGGAGAA CTACACCAGC
AAACGCGTGA TGCAGGCGCA GGGCAGCGGC CTGACCAACA AGTACGCAGA GGGCTATCCC
GGCAAGCGTT ACTACGGCGG TTGCGAGCAC GTCGACAAGG TCGAGCAACT GGCCATCGAA
CGCGCCAGAC AGCTGTTTGG TGCCGACTAT GCCAACGTTC AGCCGCATTC CGGAAGTCAG
GCCAACGCAG CGGTCTATCT GGCGCTGCTT CAGGCCGGCG ATACCGTGTT GGGCATGAGC
CTGGCGCACG GCGGTCATCT GACTCACGGT GCCAAGGTCA GCTTCTCGGG CAAACTCTAT
AACGCCGTTC AGTACGGCAT CGACACCGCG ACCGGGCTGA TCGATTACGA CGAAGTCGAG
CGCATTGCCG TCGAATGCCA GCCGAAAATG ATCATCGCCG GGTTTTCAGC CTACTCCAAG
ACCCTCGACT TCCCGCGCTT CCGCGCAATC GCCGACAAGG TGGGCGCCTA CCTGTTCGTC
GACATGGCGC ACGTCGCCGG TCTGGTTGCA GCCGGTCTTT ACCCGAATCC GCTGCCCTAC
GCAGACGTAG TCACCACCAC GACCCACAAG ACCCTGCGCG GCCCACGCGG CGGCCTGATT
CTGGCCAGGG CCAACGAAGA GCTGGAAAAG AAATTCAATT CCGCCGTCTT CCCCGGTGGT
CAGGGCGGCC CGCTGATGCA CGTGATCGCC GCCAAGGCCG TGTGTTTCAA GGAAGCCATG
GAGCCCGGCT TCAAGGCCTA TCAACAGCAG GTCATCGACA ACGCGCAAGC GATGGCGCAG
GTGTTCATCG ACCGAGGCTT CGACGTGGTC TCCGGCGGCA CCGACAACCA TCTGTTTCTG
GTCAGCCTGA TCCGTCAGGG CCTGACCGGC AAGGACGCCG ACGCCGCGCT GGGGCGTGCG
CACATCACCG TCAACAAGAA CTCGGTGCCC AACGACCCGC AGTCGCCGTT CGTGACGTCC
GGCCTGCGCA TCGGCACACC GGCCGTTACC ACCCGCGGCT TCAAGGTGAC CCAGTGCGTC
GAGCTGGCCG GCTGGATCTG CGACATCCTC GACAACCTCG GTGATGCCGA TGTCGAGGCC
GACGTCGCCA GCCAGGTCGC CGCCCTGTGC GCCGATTTTC CGGTTTATCG CTGA
 
Protein sequence
MFSKQDQIQG YDDALLSAMN AEEQRQEDHI ELIASENYTS KRVMQAQGSG LTNKYAEGYP 
GKRYYGGCEH VDKVEQLAIE RARQLFGADY ANVQPHSGSQ ANAAVYLALL QAGDTVLGMS
LAHGGHLTHG AKVSFSGKLY NAVQYGIDTA TGLIDYDEVE RIAVECQPKM IIAGFSAYSK
TLDFPRFRAI ADKVGAYLFV DMAHVAGLVA AGLYPNPLPY ADVVTTTTHK TLRGPRGGLI
LARANEELEK KFNSAVFPGG QGGPLMHVIA AKAVCFKEAM EPGFKAYQQQ VIDNAQAMAQ
VFIDRGFDVV SGGTDNHLFL VSLIRQGLTG KDADAALGRA HITVNKNSVP NDPQSPFVTS
GLRIGTPAVT TRGFKVTQCV ELAGWICDIL DNLGDADVEA DVASQVAALC ADFPVYR