Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4712 |
Symbol | |
ID | 3370262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5583431 |
End bp | 5584684 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637655079 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_237777 |
Protein GI | 66047936 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AGCAAGACCA GATCCAGGGT TATGACGATG CACTGTTGTC GGCGATGAAC GCCGAGGAGC AGCGTCAGGA AGACCATATC GAGCTGATCG CCTCGGAGAA CTACACCAGC AAACGCGTGA TGCAGGCGCA GGGCAGCGGC CTGACCAACA AGTACGCAGA GGGCTATCCC GGCAAGCGTT ACTACGGCGG TTGCGAGCAC GTCGACAAGG TCGAGCAACT GGCCATCGAA CGCGCCAGAC AGCTGTTTGG TGCCGACTAT GCCAACGTTC AGCCGCATTC CGGAAGTCAG GCCAACGCAG CGGTCTATCT GGCGCTGCTT CAGGCCGGCG ATACCGTGTT GGGCATGAGC CTGGCGCACG GCGGTCATCT GACTCACGGT GCCAAGGTCA GCTTCTCGGG CAAACTCTAT AACGCCGTTC AGTACGGCAT CGACACCGCG ACCGGGCTGA TCGATTACGA CGAAGTCGAG CGCATTGCCG TCGAATGCCA GCCGAAAATG ATCATCGCCG GGTTTTCAGC CTACTCCAAG ACCCTCGACT TCCCGCGCTT CCGCGCAATC GCCGACAAGG TGGGCGCCTA CCTGTTCGTC GACATGGCGC ACGTCGCCGG TCTGGTTGCA GCCGGTCTTT ACCCGAATCC GCTGCCCTAC GCAGACGTAG TCACCACCAC GACCCACAAG ACCCTGCGCG GCCCACGCGG CGGCCTGATT CTGGCCAGGG CCAACGAAGA GCTGGAAAAG AAATTCAATT CCGCCGTCTT CCCCGGTGGT CAGGGCGGCC CGCTGATGCA CGTGATCGCC GCCAAGGCCG TGTGTTTCAA GGAAGCCATG GAGCCCGGCT TCAAGGCCTA TCAACAGCAG GTCATCGACA ACGCGCAAGC GATGGCGCAG GTGTTCATCG ACCGAGGCTT CGACGTGGTC TCCGGCGGCA CCGACAACCA TCTGTTTCTG GTCAGCCTGA TCCGTCAGGG CCTGACCGGC AAGGACGCCG ACGCCGCGCT GGGGCGTGCG CACATCACCG TCAACAAGAA CTCGGTGCCC AACGACCCGC AGTCGCCGTT CGTGACGTCC GGCCTGCGCA TCGGCACACC GGCCGTTACC ACCCGCGGCT TCAAGGTGAC CCAGTGCGTC GAGCTGGCCG GCTGGATCTG CGACATCCTC GACAACCTCG GTGATGCCGA TGTCGAGGCC GACGTCGCCA GCCAGGTCGC CGCCCTGTGC GCCGATTTTC CGGTTTATCG CTGA
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Protein sequence | MFSKQDQIQG YDDALLSAMN AEEQRQEDHI ELIASENYTS KRVMQAQGSG LTNKYAEGYP GKRYYGGCEH VDKVEQLAIE RARQLFGADY ANVQPHSGSQ ANAAVYLALL QAGDTVLGMS LAHGGHLTHG AKVSFSGKLY NAVQYGIDTA TGLIDYDEVE RIAVECQPKM IIAGFSAYSK TLDFPRFRAI ADKVGAYLFV DMAHVAGLVA AGLYPNPLPY ADVVTTTTHK TLRGPRGGLI LARANEELEK KFNSAVFPGG QGGPLMHVIA AKAVCFKEAM EPGFKAYQQQ VIDNAQAMAQ VFIDRGFDVV SGGTDNHLFL VSLIRQGLTG KDADAALGRA HITVNKNSVP NDPQSPFVTS GLRIGTPAVT TRGFKVTQCV ELAGWICDIL DNLGDADVEA DVASQVAALC ADFPVYR
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