Gene Psyr_4627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4627 
SymbolksgA 
ID3370176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5487636 
End bp5488442 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content62% 
IMG OID637654996 
Productdimethyladenosine transferase 
Protein accessionYP_237695 
Protein GI66047854 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC AATACCAACA CCGGGCGCGC AAGCGCTTCG GGCAGAACTT CCTGCACGAC 
GCAGGCGTTA TCGACAAGAT CCTGCGTGCC ATCCGTGCCA GACCTGAAGA CCGGCTGCTG
GAAATCGGGC CGGGCCAGGG CGCACTGACC GAGGGCCTGC TCGACAGCGG CGCTCAGCTG
GACGTGGTCG AGCTGGACAA GGACCTGATC CCGATCCTGA ACGGTCAGTT CGCCAGCAAG
CCGAACTTCA ACCTGCATCA GGGCGATGCA CTGAAGTTCG ACTTCAACAC CCTCGGCGCA
GACCCGCGCA GCCTGCGGGT GGTGGGCAAC CTGCCGTACA ACATCTCGAC ACCGCTGATT
TTTCACCTGC TGCAGAACGC CAGCCTGATC CGCGACATGC ACTTCATGCT GCAAAAGGAA
GTGGTCGAGC GCATGGCTGC CGGACCCGGC GGCGGTGACT GGGGTCGTCT GTCGATCATG
GTCCAGTACC ATTGCCGCGT GGAACACCTG TTCAACGTCG GACCGGGTGC GTTCAACCCG
CCGCCGAAAG TGGACTCGGC CATTGTGCGC CTCGTCCCAT ACGAAACACT GCCGCACCCT
GCCAAGGATC ACCGTGTGCT GGAGCGCATC GTGCGTGAAG CGTTCAACCA GCGTCGCAAG
ACCTTGCGCA ACACGCTCAA GCTGCTGTTG ACCAGCGATG AGATCACCGC TTCCGGAGTA
GACGGCAGCT TGCGCCCCGA GCAGCTCGAT CTGGCTGCAT TCGTTCGTCT GGCGGACACT
CTCAGCGAAA AAGTTGTGAC AGAGTGA
 
Protein sequence
MTEQYQHRAR KRFGQNFLHD AGVIDKILRA IRARPEDRLL EIGPGQGALT EGLLDSGAQL 
DVVELDKDLI PILNGQFASK PNFNLHQGDA LKFDFNTLGA DPRSLRVVGN LPYNISTPLI
FHLLQNASLI RDMHFMLQKE VVERMAAGPG GGDWGRLSIM VQYHCRVEHL FNVGPGAFNP
PPKVDSAIVR LVPYETLPHP AKDHRVLERI VREAFNQRRK TLRNTLKLLL TSDEITASGV
DGSLRPEQLD LAAFVRLADT LSEKVVTE