Gene Psyr_4565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4565 
Symbol 
ID3370114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5428772 
End bp5429983 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content57% 
IMG OID637654934 
Producttyrosyl-tRNA synthetase 
Protein accessionYP_237633 
Protein GI66047792 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0162] Tyrosyl-tRNA synthetase 
TIGRFAM ID[TIGR00234] tyrosyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000112799 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTCGG TTGAAGAGCA GCTGGCGCTG ATCAAGCGCG GTGCAGATGA ACTCCTGGTC 
GAGGCCGAGC TGGTCGAGAA GCTGAAGCGT GGCCAGCCAC TGCGTATCAA GGCTGGTTTC
GATCCGACGG CGCCCGATCT GCACCTTGGG CACACCGTGC TTATTAACAA GCTGCGGCAG
TTCCAGGATC TGGGGCATCA GATCATCTTC CTGATCGGTG ATTTCACCGG CATGATCGGC
GACCCGAGCG GTAAAAGCGC CACGCGTCCG CCGCTCACCC GTGAGCAGGT TCTCGACTAC
GCCGAAACCT ACAAGTCTCA GGTCTTCAAG ATTCTCGATC CGGCCAAGAC CGAAGTCGCG
TTCAACTCGA CCTGGATGGA TCAGTTGAGT CCGGCTGACT TCATTCGCTT GTCTTCGCAG
TACACGGTCG CGCGGATGCT CGAGCGTGAT GATTTCGACA AGCGCTATAA AAGCAATCAG
TCCATTGCCA TTCACGAATT CCTGTACCCG CTGGTGCAGG GCTATGACTC CGTGGCCTTG
AAGGCCGACG TCGAGCTGGG CGGTACCGAT CAGAAATTCA ATCTGCTGAT GGGGCGCGAG
CTTCAGCGCG CTTATGGGCA GGAGCCGCAA TGCATCCTGA CTATGCCGTT GCTGGAAGGC
CTGGATGGCG TGAAGAAGAT GTCCAAGTCG CTAGGCAACT ACGTCGGCAT TCAAGAAGCG
CCGGGCATTA TGTATAGCAA GCTGGTGTCG ATTCCTGATT CCCTGATGTG GCGCTACTTC
GAGCTGTTGA GCTTCCGCTC GATGGAAGAG ATCGACGGCT TGAAGGCTGA TTGCGAAGCG
GGTGCCAACC CTCGCGACAT CAAGATCAAG CTGGCCGAAG AGCTGGTCGC GCGTTTCCAT
GGCGAGGAAG CTGCGGCCAA TGCGCATCGC TCTGCGGGTA ACCGTATGAA GGAAGGCGAG
CTGCCGGATG ATCTGCCGGA GCTATCGGTG GCTGCTGCCG AGGACATGCC GATCTCTGCG
GTCCTTAATA AAGCAGGCCT GGTAAAGAAC GCAGCAGTCG CTCGTGATCT GCTGGCTTCT
GGCGGTGTAC GTATAGATGG TGAGGTGGTG GATCGCAGCT TTGTATTCAA GCTGGGTACG
ACCCATGTTT GCCAGGCCGG CAAGAAGGCT TTTGGGCGCG TTACGCTGGT TTCTGAAGAA
AGTTCAAATT AA
 
Protein sequence
MKSVEEQLAL IKRGADELLV EAELVEKLKR GQPLRIKAGF DPTAPDLHLG HTVLINKLRQ 
FQDLGHQIIF LIGDFTGMIG DPSGKSATRP PLTREQVLDY AETYKSQVFK ILDPAKTEVA
FNSTWMDQLS PADFIRLSSQ YTVARMLERD DFDKRYKSNQ SIAIHEFLYP LVQGYDSVAL
KADVELGGTD QKFNLLMGRE LQRAYGQEPQ CILTMPLLEG LDGVKKMSKS LGNYVGIQEA
PGIMYSKLVS IPDSLMWRYF ELLSFRSMEE IDGLKADCEA GANPRDIKIK LAEELVARFH
GEEAAANAHR SAGNRMKEGE LPDDLPELSV AAAEDMPISA VLNKAGLVKN AAVARDLLAS
GGVRIDGEVV DRSFVFKLGT THVCQAGKKA FGRVTLVSEE SSN