Gene Psyr_4553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4553 
SymbolrpsL 
ID3370093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5407594 
End bp5407965 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content55% 
IMG OID637654913 
Product30S ribosomal protein S12 
Protein accessionYP_237621 
Protein GI66047780 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0662018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTA TCAACCAGCT GGTACGTCAG CCGCGTAAGC GTATCGTCGA GAAATCCGAC 
GTACCTGCGC TGCAGAACTG CCCGCAACGT CGCGGTGTGT GCACTCGTGT GTATACCACC
ACGCCGAAAA AACCTAACTC GGCATTGCGT AAAGTCTGCC GTGTGCGCCT GACCAACGGT
TTCGAGGTTT CCTCGTACAT CGGTGGTGAA GGTCACAACC TGCAAGAACA CAGCGTGGTA
CTGATCCGTG GCGGTCGTGT AAAAGACTTG CCAGGTGTTC GTTACCACAC CGTTCGTGGT
TCTCTGGATA CCTCCGGCGT TAAAGGCCGT AACCAGGGTC GCTCGAAATA CGGTACCAAG
AAGCCTAAGT AG
 
Protein sequence
MATINQLVRQ PRKRIVEKSD VPALQNCPQR RGVCTRVYTT TPKKPNSALR KVCRVRLTNG 
FEVSSYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHTVRG SLDTSGVKGR NQGRSKYGTK
KPK