| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4548 |
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| Symbol | rplC |
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| ID | 3370088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 5402470 |
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| End bp | 5403105 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637654908 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_237616 |
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| Protein GI | 66047775 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00256892 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0637159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTATTG GTGTAGTCGG TCGTAAATGC GGTATGACCC GTATTTTCAC CGAAGAAGGT
GTCTCCATTC CGGTCACGGT CATTGAGATC GAGCCGAATC GCGTCACTCA GTTCAAAACC
GAAGAAACCG ATGGCTATCG TGCAGTGCAA GTCACTGTCG GCGAGCGTCG CGCTTCGCGT
GTTACAGCCG CTCAGGCTGG CCACTTCGCC AAAGCGAACG TTGCCGCCGG TCGTACCGTC
ATGGAATTCC GTCTTGAAGA AGGCGACTAC CAGGCTGGCG ATCAGATCAA CGCTGAAATC
TTCGCCGCTG GTCAACTGGT TGATGTAACC GGTCAGTCCA AGGGTAAAGG CTTCCAGGGT
ACGATCAAGC GTTGGAATTT CCGTGGTCAA GACAATACCC ACGGTAACTC CGTCTCCCAC
CGCGTCCCAG GCTCTATCGG CCAGTGCCAG ACTCCTGGTC GTGTATTCAA GGGCAAAAAA
ATGTCCGGTC ATATGGGCGC TGAGCGCGTG ACCGTGCAGT CCTTGGAAGT AGTGCGCGTG
GACGCTGAAC GCAATCTGTT GTTGGTCAAG GGTGCTGTTC CTGGCGCTAC TGGCGGCAAC
CTGGTTGTAC GTCCGGCAGC CAAGGCTCGC GGTTAA
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| Protein sequence | MTIGVVGRKC GMTRIFTEEG VSIPVTVIEI EPNRVTQFKT EETDGYRAVQ VTVGERRASR
VTAAQAGHFA KANVAAGRTV MEFRLEEGDY QAGDQINAEI FAAGQLVDVT GQSKGKGFQG
TIKRWNFRGQ DNTHGNSVSH RVPGSIGQCQ TPGRVFKGKK MSGHMGAERV TVQSLEVVRV
DAERNLLLVK GAVPGATGGN LVVRPAAKAR G
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