Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4522 |
Symbol | |
ID | 3370062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5388173 |
End bp | 5389618 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637654882 |
Product | catalase |
Protein accession | YP_237590 |
Protein GI | 66047749 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0753] Catalase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.587252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGA AGACCCTTAC GACCGCCAGC GGTGCCCCCG TCGCAGACAA TCAGAACTCC CGTTCGGCAG GCCCACGTGG TCCTCTATTG CTCGATGATT TCCATCTGAT CGAAAAGCTT GCCCACTTCA ACCGTGAAAA CATCCCGGAG CGTCGCGTGC ACGCCAAGGG GTCGGGTGCT CATGGTACGT TCACCGTGAC CCGCGACATC AGCCAATATA CCAGCGCCAG GCTGTTCGAC ACGGTTGGCA AGCAGACGCC GATTTTCCTG CGCTTCTCCA CCGTAGGCGG CGAGCGTGGT TCGGCTGATA CCGAGCGTGA CCCTCGTGGC TTTGCGATCA AGTTTTACAC CGAGGAAGGT AACTGGGACA TCGTCGGTAA CAACACGCCG GTGTTCTTTA TCCGTGACCC CCTGAAATTC CCTGATTTCA TTCACACTCA GAAGCGCCTG CCGCAGACCA ATCTGAAGAG CCCTCAGATG ATGTGGGATT TCTGGTCGCA CTCGCCTGAA GCGCTGCACC AGGTCACTAT TCTGTTCTCC GATCGTGGCA TTCCGGACGG CTACCGTCAC ATGCACGGCT TCGGCAGCCA CACCTATAGC CTCATCAGTG CAGCAGGTGA GCGTCATTGG GTGAAGTGGC ATTACAAGAC CCGCCAGGGG ATCAAGAATC TGACGCCCGC AGAGGCTGCG CGCATTGCCG GTACTGATCC TGATTACGCT CAGCGCGATC TGTTCACTGC CATCGAGAAG GGCGACTTCC CCAAGTGGCA GGTGTGCATC CAGTTGATGA CCGAAGCTCA GGCGGCGAAT CATCATGAAA ACCCGTTCGA CGTGACCAAG ACCTGGTCGC AGAAAGAATA CCCGCTGATC GAGGTGGGCG AGCTGGAGTT GAACCGTAAC CCGCTCAACT ACTTTGCCGA AGTCGAGCAG GCCGCGTTTG GCCCAAGCAA CATGGTGCCA GGCGTTGGCC TTTCGCCAGA CCGCATGTTG CAAGGGCGCG TATTTGCCTA TGCTGATGCG CATCGCTATC GCGTAGGTAC CAACCACCAG CAGTTGCCGA TCAATGCGCC CAAGAGTCCG GTGCACAGCT ATCAGCGTGA CGGGGCGATG GCCTTCGGCA CCAATGGCGG TGCGACGCCA AACTATGAAC CGAACAGCTA CTCGGATGCG CCGAAAGAGA ATCCGCGCTA CGCGGAGCCT GCGCTGTCTC TGAACGGTGC AGCAGATCGT CATGATCATC GAGTAGACGG CGATTACTAC AGTCAGGCAG GCAAGTTGTT CAACCTGATG AGCGCTGATC AGCAAGCCCT GTTGATTGGC AATATTGCCG GCGCAATGGC AGGCGTTTCC AGTGATGTCG TGCAACGTCA GTTGCAGCAT TTCTACAAAG CTGACCCTGC TTACGGCGAA GGCATTGCCC GCGCATTGGA CGTAAAACTG GGCTGA
|
Protein sequence | MSQKTLTTAS GAPVADNQNS RSAGPRGPLL LDDFHLIEKL AHFNRENIPE RRVHAKGSGA HGTFTVTRDI SQYTSARLFD TVGKQTPIFL RFSTVGGERG SADTERDPRG FAIKFYTEEG NWDIVGNNTP VFFIRDPLKF PDFIHTQKRL PQTNLKSPQM MWDFWSHSPE ALHQVTILFS DRGIPDGYRH MHGFGSHTYS LISAAGERHW VKWHYKTRQG IKNLTPAEAA RIAGTDPDYA QRDLFTAIEK GDFPKWQVCI QLMTEAQAAN HHENPFDVTK TWSQKEYPLI EVGELELNRN PLNYFAEVEQ AAFGPSNMVP GVGLSPDRML QGRVFAYADA HRYRVGTNHQ QLPINAPKSP VHSYQRDGAM AFGTNGGATP NYEPNSYSDA PKENPRYAEP ALSLNGAADR HDHRVDGDYY SQAGKLFNLM SADQQALLIG NIAGAMAGVS SDVVQRQLQH FYKADPAYGE GIARALDVKL G
|
| |