Gene Psyr_4505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4505 
Symbol 
ID3370045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5369234 
End bp5370340 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content63% 
IMG OID637654865 
ProductABC transporter 
Protein accessionYP_237573 
Protein GI66047732 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.615344 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC TCACCCCTAT TACCTGCGCG CCGGATATTA TCCTCACGGA CCTGCACAAA 
ACCTACGGCA CCGAGCCCAT CCTTCACGGG CTCGACCTGG TTTTCAAGGC GGGTGAGCTT
AACGTCATCC TCGGCCCGTC CGGGTGTGGC AAGTCCACGC TGCTGCGCAT GGTGGCCGGG
CTGGAAGAGG TCAGCCAAGG GCAGATCCTC ATGGGTGGCC GCGACGTCAC GCGCCTGCCG
CCCAAGGAGC GCGGCTGCGC CATGGTGTTT CAGAACTACG CGCTCTACCC GCACATGAGC
GTGGCCGACA ACATCGGCTA CGCGCTCACG CTGGCGCGGG TTGCACGCAA GGAGCGTGAG
CAACGCATCC GCGAGTGCGC CGCTTCGCTG GGTCTGGAAG AGCTACTGCA ACGCAAGCCC
GGAGAACTTT CCGGCGGCCA GCGCCAGCGC GTCGCTATCG GTCGGGCGTT GATCCGCAAA
CCGCCGGTGC TGCTGTTCGA TGAGCCGCTG TGCAACCTGG ACAGCGCGCT GCGTCATGAA
ATGCGTCTGT TGATTCGCAG CCTGCACCGG CAGACCGGCG CGACGATCCT GTATGTCACC
CACGATCAGA CCGAAGCCAT GACCCTCGCC GAGCGCGTGG TGATTCTCGA CAAAGGCCGT
GTCGAGCAGA TCGGCACGCC TGCGCAGATC TACGATAAAC CCGCCAGCAC ATTCGTCGCC
AGCTTCATCG GCACGCCGCC CATGAACCTG CTGCCGGTGC ACTGCCTGGA CGACAAGATC
TTGATGCTCG CCGATGGTCA ACGCCTGCCC ATCAAGCTCG GCATTGCCAG CAACCGGACC
GGCAAATGGC TGATGGGCCT GCGCCCCGAG ACCTTCATGC TCGATCAACA AGGCGTGACT
GCCACAGTGG AGTCTTCAGA GAATCTGGGC AGCCACACGC TGCTGTATTG CCAACTGGCT
GGAACGCGCT GCGTTGTCAG CCTCGCCGGA CGGCAACACC AGATACCCGG CACCCAGGTT
CGACTGGCGA TCAATTCCAC GCCCTTGCTG TTCGATATCG AGACCGGCCA GCGCCAGCTC
GTGACCTTTT CCCACACCAC CAAGTGA
 
Protein sequence
MNALTPITCA PDIILTDLHK TYGTEPILHG LDLVFKAGEL NVILGPSGCG KSTLLRMVAG 
LEEVSQGQIL MGGRDVTRLP PKERGCAMVF QNYALYPHMS VADNIGYALT LARVARKERE
QRIRECAASL GLEELLQRKP GELSGGQRQR VAIGRALIRK PPVLLFDEPL CNLDSALRHE
MRLLIRSLHR QTGATILYVT HDQTEAMTLA ERVVILDKGR VEQIGTPAQI YDKPASTFVA
SFIGTPPMNL LPVHCLDDKI LMLADGQRLP IKLGIASNRT GKWLMGLRPE TFMLDQQGVT
ATVESSENLG SHTLLYCQLA GTRCVVSLAG RQHQIPGTQV RLAINSTPLL FDIETGQRQL
VTFSHTTK