Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4505 |
Symbol | |
ID | 3370045 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5369234 |
End bp | 5370340 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654865 |
Product | ABC transporter |
Protein accession | YP_237573 |
Protein GI | 66047732 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.615344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCGC TCACCCCTAT TACCTGCGCG CCGGATATTA TCCTCACGGA CCTGCACAAA ACCTACGGCA CCGAGCCCAT CCTTCACGGG CTCGACCTGG TTTTCAAGGC GGGTGAGCTT AACGTCATCC TCGGCCCGTC CGGGTGTGGC AAGTCCACGC TGCTGCGCAT GGTGGCCGGG CTGGAAGAGG TCAGCCAAGG GCAGATCCTC ATGGGTGGCC GCGACGTCAC GCGCCTGCCG CCCAAGGAGC GCGGCTGCGC CATGGTGTTT CAGAACTACG CGCTCTACCC GCACATGAGC GTGGCCGACA ACATCGGCTA CGCGCTCACG CTGGCGCGGG TTGCACGCAA GGAGCGTGAG CAACGCATCC GCGAGTGCGC CGCTTCGCTG GGTCTGGAAG AGCTACTGCA ACGCAAGCCC GGAGAACTTT CCGGCGGCCA GCGCCAGCGC GTCGCTATCG GTCGGGCGTT GATCCGCAAA CCGCCGGTGC TGCTGTTCGA TGAGCCGCTG TGCAACCTGG ACAGCGCGCT GCGTCATGAA ATGCGTCTGT TGATTCGCAG CCTGCACCGG CAGACCGGCG CGACGATCCT GTATGTCACC CACGATCAGA CCGAAGCCAT GACCCTCGCC GAGCGCGTGG TGATTCTCGA CAAAGGCCGT GTCGAGCAGA TCGGCACGCC TGCGCAGATC TACGATAAAC CCGCCAGCAC ATTCGTCGCC AGCTTCATCG GCACGCCGCC CATGAACCTG CTGCCGGTGC ACTGCCTGGA CGACAAGATC TTGATGCTCG CCGATGGTCA ACGCCTGCCC ATCAAGCTCG GCATTGCCAG CAACCGGACC GGCAAATGGC TGATGGGCCT GCGCCCCGAG ACCTTCATGC TCGATCAACA AGGCGTGACT GCCACAGTGG AGTCTTCAGA GAATCTGGGC AGCCACACGC TGCTGTATTG CCAACTGGCT GGAACGCGCT GCGTTGTCAG CCTCGCCGGA CGGCAACACC AGATACCCGG CACCCAGGTT CGACTGGCGA TCAATTCCAC GCCCTTGCTG TTCGATATCG AGACCGGCCA GCGCCAGCTC GTGACCTTTT CCCACACCAC CAAGTGA
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Protein sequence | MNALTPITCA PDIILTDLHK TYGTEPILHG LDLVFKAGEL NVILGPSGCG KSTLLRMVAG LEEVSQGQIL MGGRDVTRLP PKERGCAMVF QNYALYPHMS VADNIGYALT LARVARKERE QRIRECAASL GLEELLQRKP GELSGGQRQR VAIGRALIRK PPVLLFDEPL CNLDSALRHE MRLLIRSLHR QTGATILYVT HDQTEAMTLA ERVVILDKGR VEQIGTPAQI YDKPASTFVA SFIGTPPMNL LPVHCLDDKI LMLADGQRLP IKLGIASNRT GKWLMGLRPE TFMLDQQGVT ATVESSENLG SHTLLYCQLA GTRCVVSLAG RQHQIPGTQV RLAINSTPLL FDIETGQRQL VTFSHTTK
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