Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4496 |
Symbol | |
ID | 3370036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5359307 |
End bp | 5360020 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637654856 |
Product | TonB, C-terminal |
Protein accession | YP_237564 |
Protein GI | 66047723 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCGA CGCTGACACC CCTGCTGCAC CTTCAGCCAT TGCCTGCCGG CAGCGCCTCG CGATTGCTGC GCCGAGGATG CGCGATAACG CTGGTGGTGG CCGTGCATAT TTTGGCATTG AGCATGGTGA CCGGGTCATC GCCCCCTGCG CTTGCGCCGC AGGTGACTCG CACTATTTAC GCCTCGGTCA TCAATGAACC GACTCCGGCG CCAGCCGCAA GTGCCGCGCC CACGCCACCG CCTCCCGTTG CCCCGGTCGT ACCGGCACCA GCGTCTGTGG CCGTTCAGCC GGTGGCCCGG CACAAGCCCG TGGCCAAACC GCAGGTGATG CAACGCCCCG TTGTGGCCGC CGCAACGTCT GCCCCCGCGA CCATCAGCAC TGCGGCTGCC GCACCGGTAG TTGCGCAAAC TCCCGCACCA CCGCCGCAGC CCAAGACCCT CACCCGTGGC GTCGAATACG TGCATGAACC ACAACCCGAC TATCCCGACA GCGCGCGTGA AGAGGGCCAC GAGGGCACCG TGATCCTGCG GGTGCTGGTG GACGAGCACG GCAAGCCCGG CGCGGTGGAC ATCGTACGCT CCTCGGGCTT TGGCAACCTC GACGAGGCGG GCAGGACGGC TGTGCGCGGC GCACTGTTCA AGCCTCATTT GGAGGAGGGT CATGCGGTGT CGGTGTACGT GATCGTGCCG TTGCGATTCC AGCTCGACAG TTAG
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Protein sequence | MDATLTPLLH LQPLPAGSAS RLLRRGCAIT LVVAVHILAL SMVTGSSPPA LAPQVTRTIY ASVINEPTPA PAASAAPTPP PPVAPVVPAP ASVAVQPVAR HKPVAKPQVM QRPVVAAATS APATISTAAA APVVAQTPAP PPQPKTLTRG VEYVHEPQPD YPDSAREEGH EGTVILRVLV DEHGKPGAVD IVRSSGFGNL DEAGRTAVRG ALFKPHLEEG HAVSVYVIVP LRFQLDS
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