Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4491 |
Symbol | |
ID | 3370031 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5352994 |
End bp | 5353674 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637654851 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_237559 |
Protein GI | 66047718 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC TCGAACCCGC TGCACTGGCC CAGGCCATCG ATCACACCTT GTTGGCGGCG GATGCCAGCC GAGAGCAGAT TGCCACGCTT TGCGCAGAAG CCCGGGAACA CGGCTTCTAC TCGGTGTGCG TGAACTCCAG CCAGGTGCCT TTTGCCGCCC GACAACTGGC CGGGTCTGCC GTGAAGGTCT GTGCGGTGGT GGGCTTTCCG CTGGGCGCCG GGCTGAGTGC CAGCAAGGCG TCGGAAGCAG CCCTGACGAT CGCCGCCGGG GCTCAGGAAA TCGACATGGT GCTGAACATC GGCTGGCTCA AGGACGGTCT GTTCGATGAG GTCCGCGACG ATATCGCCGC GGTGCTGCAA GCCTGTGGCA AGGTGCCGCT CAAGGTGATC CTGGAAACCT GCCTGCTCGA TGAGGCGCAG AAGGTGCGCG CCTGCGAGAT CTGCCGCGAG CTGGGCGTGG CATTCGTCAA GACCTCCACT GGCTTCAGCC GCAGCGGCGC GACGCTCGAG GATGTGGCGC TGATGCGCCG TGTGGTAGGC CCTGACATCG GCGTCAAGGC GTCTGGCGGG GTGCGTGACG TGGCCACGGC CAGAGCGATG ATCGAAGCTG GCGCAACGCG CCTGGGCACC AGTTCCGGGA TTGCGATCGT GACCGGCGCA GGTACGGGGG CGGGTTATTG A
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Protein sequence | MNSLEPAALA QAIDHTLLAA DASREQIATL CAEAREHGFY SVCVNSSQVP FAARQLAGSA VKVCAVVGFP LGAGLSASKA SEAALTIAAG AQEIDMVLNI GWLKDGLFDE VRDDIAAVLQ ACGKVPLKVI LETCLLDEAQ KVRACEICRE LGVAFVKTST GFSRSGATLE DVALMRRVVG PDIGVKASGG VRDVATARAM IEAGATRLGT SSGIAIVTGA GTGAGY
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