Gene Psyr_4491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4491 
Symbol 
ID3370031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5352994 
End bp5353674 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content65% 
IMG OID637654851 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_237559 
Protein GI66047718 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCGC TCGAACCCGC TGCACTGGCC CAGGCCATCG ATCACACCTT GTTGGCGGCG 
GATGCCAGCC GAGAGCAGAT TGCCACGCTT TGCGCAGAAG CCCGGGAACA CGGCTTCTAC
TCGGTGTGCG TGAACTCCAG CCAGGTGCCT TTTGCCGCCC GACAACTGGC CGGGTCTGCC
GTGAAGGTCT GTGCGGTGGT GGGCTTTCCG CTGGGCGCCG GGCTGAGTGC CAGCAAGGCG
TCGGAAGCAG CCCTGACGAT CGCCGCCGGG GCTCAGGAAA TCGACATGGT GCTGAACATC
GGCTGGCTCA AGGACGGTCT GTTCGATGAG GTCCGCGACG ATATCGCCGC GGTGCTGCAA
GCCTGTGGCA AGGTGCCGCT CAAGGTGATC CTGGAAACCT GCCTGCTCGA TGAGGCGCAG
AAGGTGCGCG CCTGCGAGAT CTGCCGCGAG CTGGGCGTGG CATTCGTCAA GACCTCCACT
GGCTTCAGCC GCAGCGGCGC GACGCTCGAG GATGTGGCGC TGATGCGCCG TGTGGTAGGC
CCTGACATCG GCGTCAAGGC GTCTGGCGGG GTGCGTGACG TGGCCACGGC CAGAGCGATG
ATCGAAGCTG GCGCAACGCG CCTGGGCACC AGTTCCGGGA TTGCGATCGT GACCGGCGCA
GGTACGGGGG CGGGTTATTG A
 
Protein sequence
MNSLEPAALA QAIDHTLLAA DASREQIATL CAEAREHGFY SVCVNSSQVP FAARQLAGSA 
VKVCAVVGFP LGAGLSASKA SEAALTIAAG AQEIDMVLNI GWLKDGLFDE VRDDIAAVLQ
ACGKVPLKVI LETCLLDEAQ KVRACEICRE LGVAFVKTST GFSRSGATLE DVALMRRVVG
PDIGVKASGG VRDVATARAM IEAGATRLGT SSGIAIVTGA GTGAGY