| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4488 |
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| Symbol | |
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| ID | 3370028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5349720 |
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| End bp | 5351051 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654848 |
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| Product | L-fucose permease |
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| Protein accession | YP_237556 |
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| Protein GI | 66047715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | [TIGR00885] L-fucose:H+ symporter permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.530054 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGC CTGCGCTGCA ACAAACTCCG GACGGGTTCT ACCTGAACCG CACGCCGTGG
TTCGCCTTTC TCCTGCTCTG CAGCATATTT GCCCTGTGGG CGGCGGCCGC GAGCATGAAC
GACGTGCTGA TCGCGCACTT CAAGAAGGCC TTCCTGCTCA GTGACTTCCA GACCGCTTTC
GTGCAGTCGG CGTTTTACCT GGGTTACTTC TTCGTCGCCA TTCCGGCGGC ATTGGTGGTG
CGCCGCTTCA GCTACAAGAC CACTATCCTC ATCGGCCTGA TGCTGTACCT GTTCGGCTGC
GCCCTGTTCT TTCCGGCGGC GTCGACTGCC AAGTACGGCA TGTTCCTGAT GGCGCTGTTC
GTCATCGCCG CCGGCCTGTC GTTTCTCGAG ACCGCGTGCA ACACCTACTC GACACTGATG
GGGCCGCGGG AAACCGGCAC GCGGCGCCTG AACATCTCGC AGACCTTCCA CCCATTCGGC
GCCATGACCG GGGTGTACGT CGGCAGCTTC GTGATGTTCA AGGACACAGA CGCCACGCGC
GAACAGTTGG CCCAGATGAG CGCCAGCGAG GCGGCGGCGC AGCAGCTGCA AATGATCCAG
TCGACCCTGC TGCCGTACAA ATGGATGATC GCGGTACTCA TATTGATGTT CATCCTGATA
GCCATCACCC GCTTCCCCGC GTGCAAGGGC AACGGCACCG TCAGCGAATC GCGTTCGAGC
ATCGGCCAGA GCCTCGGCCG CCTGCGGCGC AATCCGCGCT TTTGCTTCGG TGTGCTGGCG
CAGTTCCTCT ACGTCGGCGC GCAGGTCGGG GTATGGAGTT TCACTATTCG CCTGGCCATG
CAAATGGGCG GCATGAACGA GCGCAGTGCC TCGTGGTTTC TGCTGACCAC CTTTGCCGCC
TATTTTATCG GCAAGATGAT CGCCAATCTG CTGATGCGCA AAATGCACCC GGCCAAAGTC
CTCGCGGTGT ATGGCGTGCT GTGCATCGTG CTGCTGGCCT ACACTATCCT GGTGCCGAAT
ATCACTGCGG TGTATGCGGC CGTAGGGGTC AGTGTGTTTC TCGGGCCTTG CTGGCCGACC
ATCTATGGTC TGACCATTGA CGGGCTCGGC GAGGACACCG GTGTCGGCGG CTCGTTGCTG
GTGATGAGCA TCGTTGGCGG TGGCGTGATG CCGATCTTCC AGGGCCTGCT CAGCGACGCC
AATGGCGGCA ACATGCAGAT TGCCTACAGC GTGCCGCTGC TGTGTTTCGT GGCCATCGTT
ATGTACGCAG TGTACTGCAT GCGTCAGCCG CAACCGGTGC TGGGTGGTTC GGCCACGGCG
GTAGCGCAAT GA
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| Protein sequence | MNKPALQQTP DGFYLNRTPW FAFLLLCSIF ALWAAAASMN DVLIAHFKKA FLLSDFQTAF
VQSAFYLGYF FVAIPAALVV RRFSYKTTIL IGLMLYLFGC ALFFPAASTA KYGMFLMALF
VIAAGLSFLE TACNTYSTLM GPRETGTRRL NISQTFHPFG AMTGVYVGSF VMFKDTDATR
EQLAQMSASE AAAQQLQMIQ STLLPYKWMI AVLILMFILI AITRFPACKG NGTVSESRSS
IGQSLGRLRR NPRFCFGVLA QFLYVGAQVG VWSFTIRLAM QMGGMNERSA SWFLLTTFAA
YFIGKMIANL LMRKMHPAKV LAVYGVLCIV LLAYTILVPN ITAVYAAVGV SVFLGPCWPT
IYGLTIDGLG EDTGVGGSLL VMSIVGGGVM PIFQGLLSDA NGGNMQIAYS VPLLCFVAIV
MYAVYCMRQP QPVLGGSATA VAQ
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