Gene Psyr_4487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4487 
Symbol 
ID3370027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5348764 
End bp5349690 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content65% 
IMG OID637654847 
Productcarbohydrate kinase, PfkB 
Protein accessionYP_237555 
Protein GI66047714 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TTGCAGTCAT CGGCAGCAAC ATGGTCGACC TGATCACTTA CATCGAACGC 
ATGCCCGCCC AGGGCGAAAC GCTCGAGGCA CCGCGTTTTG CCATGGGGTG CGGCGGCAAG
GGCGCCAATC AGGCCGCCGC CGCGGCGCTG CTGGGCGCCG ACGTGCTGAT GCTCAGCAAG
GTCGGCGACG ATGCGTTCGC CGATACCACC CTGGCCAATT TTCAGCGACT GGGCATTGAT
ACGCGCTTCG TCGAACGGGT ACCGGGCGTG TCGAGCGGCG TGGCACCGAT CTTCGTCCAG
GAGAACTCCC ATAACAGCAT CCTTATCGTC AAAGGCGCCA ATGCCCACCT GAGCCCGGCC
GATATCGACC GCGCCGAGGC GCAACTGCGC GATTGCGCTT TGATTGTGCT GCAACTGGAA
GTCGAGCTGG CGACCGTCTA CCACGCCATC GCCTTCGCTC ACCGGCACGC AATCCCGGTG
CTGCTCAATC CGGCCCCAGC CTTGGCCGGC CTGAGCCGCG AGCACCTCGC GCAGCTGGAC
TTCCTGATCC CCAACGAGAG CGAGCTGGCC CTGATCAGCG GCCAGCCGGT GACGTGCGCC
GAGGAAGCGG CTCAGGCTGC ACGCCAATTG GTCGCGCTGG GCGTACGCCA CGTCATCGTC
ACCCTCGGCG AACAAGGGGC GCTGTACGTC GGCGCCGAAG GCGAGTGGCA GGTGCCAGGG
GTCAAGGTTC AGGCGCGTGA CACCACCGGT GCCGGTGACG CCTTCATTGG CTGCTTCGCC
CGGCACTGGA GCCAGGACGG AAATATTCGC CAAGCCATGC ACCAGGCGGT GGCCTACTCC
GCCTGCTCGG TCACCGGCCT CGGCACGCAA TCTTCTTACC CCGATGCGTC CACGTTTGCA
CGATTCCTCG ATGCATCGGC CAACTGA
 
Protein sequence
MSKIAVIGSN MVDLITYIER MPAQGETLEA PRFAMGCGGK GANQAAAAAL LGADVLMLSK 
VGDDAFADTT LANFQRLGID TRFVERVPGV SSGVAPIFVQ ENSHNSILIV KGANAHLSPA
DIDRAEAQLR DCALIVLQLE VELATVYHAI AFAHRHAIPV LLNPAPALAG LSREHLAQLD
FLIPNESELA LISGQPVTCA EEAAQAARQL VALGVRHVIV TLGEQGALYV GAEGEWQVPG
VKVQARDTTG AGDAFIGCFA RHWSQDGNIR QAMHQAVAYS ACSVTGLGTQ SSYPDASTFA
RFLDASAN