Gene Psyr_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4473 
Symbol 
ID3370013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5333258 
End bp5333944 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content61% 
IMG OID637654833 
ProductOmpW 
Protein accessionYP_237541 
Protein GI66047700 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGC ATCTGTTACG CGCGTCCCTT GTCGCGCTTG CCCTTACTGC CCCGGTCGCG 
GCACACGCCT ACCAGCCTGG CGACTTCATC GTTCGCGCCG GTGTCGCGCA CGTTCAACCC
AATGAAGACA GCGGCGAAGT GCGCCTCGAC GGTGCCAAGG TTTCCGGCAC CAAAGCGACT
GTCGACGGCG AAAACCAGCT GGGCCTGACC TTCGCCTACA TGCTGACCCA GCACGTCGGT
ATCGAGCTGC TGGCCGCCAC ACCGTTCAGC CATACCGTGT CGGTCAAAGG CCTCGGGCCT
GGCCTGGATG GCAAGCTGGC CGATATCAAA CAACTGCCGC CGACGCTGTC GTTGCAGTAC
TACCCGATGG AACCATCGTC GAAGTTCCAG CCGTATGCCG GCGTGGGCAT CAACTACACC
ACCTTCTTCG ATACCGACCT GACCGGCAAC CGCAAGGATC AGGGTTTCAG CAACCTCAAG
CTCAAGGACT CGGTCGGCCT CGCCGGGCAG TTGGGCATGG ATTACATGAT CACCGACAAC
GTACTGCTCA ACGCCTCGGT CTGGTACGTC GACATCGACA CCAAAGCAAC CGTGGACGGC
CCGTCAGCCC TGGCCGTCGG CAAGACCAAG GTCGACGTGG ACATCGACCC GTGGGTGTAC
ATGGTGGGTG TGGGTTACAA GTTCTGA
 
Protein sequence
MHKHLLRASL VALALTAPVA AHAYQPGDFI VRAGVAHVQP NEDSGEVRLD GAKVSGTKAT 
VDGENQLGLT FAYMLTQHVG IELLAATPFS HTVSVKGLGP GLDGKLADIK QLPPTLSLQY
YPMEPSSKFQ PYAGVGINYT TFFDTDLTGN RKDQGFSNLK LKDSVGLAGQ LGMDYMITDN
VLLNASVWYV DIDTKATVDG PSALAVGKTK VDVDIDPWVY MVGVGYKF