Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4473 |
Symbol | |
ID | 3370013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 5333258 |
End bp | 5333944 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637654833 |
Product | OmpW |
Protein accession | YP_237541 |
Protein GI | 66047700 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAAGC ATCTGTTACG CGCGTCCCTT GTCGCGCTTG CCCTTACTGC CCCGGTCGCG GCACACGCCT ACCAGCCTGG CGACTTCATC GTTCGCGCCG GTGTCGCGCA CGTTCAACCC AATGAAGACA GCGGCGAAGT GCGCCTCGAC GGTGCCAAGG TTTCCGGCAC CAAAGCGACT GTCGACGGCG AAAACCAGCT GGGCCTGACC TTCGCCTACA TGCTGACCCA GCACGTCGGT ATCGAGCTGC TGGCCGCCAC ACCGTTCAGC CATACCGTGT CGGTCAAAGG CCTCGGGCCT GGCCTGGATG GCAAGCTGGC CGATATCAAA CAACTGCCGC CGACGCTGTC GTTGCAGTAC TACCCGATGG AACCATCGTC GAAGTTCCAG CCGTATGCCG GCGTGGGCAT CAACTACACC ACCTTCTTCG ATACCGACCT GACCGGCAAC CGCAAGGATC AGGGTTTCAG CAACCTCAAG CTCAAGGACT CGGTCGGCCT CGCCGGGCAG TTGGGCATGG ATTACATGAT CACCGACAAC GTACTGCTCA ACGCCTCGGT CTGGTACGTC GACATCGACA CCAAAGCAAC CGTGGACGGC CCGTCAGCCC TGGCCGTCGG CAAGACCAAG GTCGACGTGG ACATCGACCC GTGGGTGTAC ATGGTGGGTG TGGGTTACAA GTTCTGA
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Protein sequence | MHKHLLRASL VALALTAPVA AHAYQPGDFI VRAGVAHVQP NEDSGEVRLD GAKVSGTKAT VDGENQLGLT FAYMLTQHVG IELLAATPFS HTVSVKGLGP GLDGKLADIK QLPPTLSLQY YPMEPSSKFQ PYAGVGINYT TFFDTDLTGN RKDQGFSNLK LKDSVGLAGQ LGMDYMITDN VLLNASVWYV DIDTKATVDG PSALAVGKTK VDVDIDPWVY MVGVGYKF
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