Gene Psyr_4453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4453 
Symbol 
ID3369993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5318439 
End bp5319056 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID637654813 
Producturease accessory protein UreG 
Protein accessionYP_237521 
Protein GI66047680 
COG category[K] Transcription
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase 
TIGRFAM ID[TIGR00101] urease accessory protein UreG 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCC AACCTCTGCG TGTCGGAATC GGTGGCCCGG TCGGATCCGG CAAGACGGCG 
CTGACCCTGG CGCTGTGCCT GGCATTGCGC GACCGCTATA ACCTGGCCGT CGTGACCAAC
GATATCTATA CCCGTGAAGA CGCCGATTTT CTGGTGCGTA ACGAGGCACT GGCACCAGAG
CGCATCATCG GCGTTGAAAC CGGCGGCTGC CCGCATACCG CCATTCGTGA GGATGCTTCG
ATCAACCTGG AAGCGGTCGA CCAACTCAAT CGCCGCTTCG AAGGCCTGGA CCTGATCATC
GTCGAGTCCG GTGGCGACAA CCTTTCCGCG ACCTTCAGCC CGGAGCTTTC CGACCTGACC
ATCTACGTAA TCGACGTGTC GGCCGGCGAC AAGCTGCCGC GCAAGGGCGG TCCGGGCATC
TGCAAGTCCG ACCTGCTGGT GATCAACAAG ATCGACCTCG CCCCTTTGGT GGGCGCGTCA
CTGGAGATGA TGGACAGCGA CACGCGCAGG ATGCGTGGCG AAAAGCCGTT CGTGTTCAGC
AATCAGAAAA CCGGTCAGGG TCTGGAACAG ATCATTGCCT TCATTGAGCG CCAGGGCCTG
CTGACTGCGG CCGCCTGA
 
Protein sequence
MNSQPLRVGI GGPVGSGKTA LTLALCLALR DRYNLAVVTN DIYTREDADF LVRNEALAPE 
RIIGVETGGC PHTAIREDAS INLEAVDQLN RRFEGLDLII VESGGDNLSA TFSPELSDLT
IYVIDVSAGD KLPRKGGPGI CKSDLLVINK IDLAPLVGAS LEMMDSDTRR MRGEKPFVFS
NQKTGQGLEQ IIAFIERQGL LTAAA