Gene Psyr_4399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4399 
Symbol 
ID3369939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5261276 
End bp5261728 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content57% 
IMG OID637654759 
Product3-dehydroquinate dehydratase 
Protein accessionYP_237467 
Protein GI66047626 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0757] 3-dehydroquinate dehydratase II 
TIGRFAM ID[TIGR01088] 3-dehydroquinate dehydratase, type II 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCA TCCTGGTCCT TCACGGACCC AACCTGAACC TGCTGGGCAC TCGGGAACCC 
GGGGTCTACG GCACTATCAC CCTGCCTCAG ATCAATCAGG ACCTGGAGCA GCGCGCTCGC
GATGCCGGTC ACCATCTGAT GTATCTGCAA AGCAACGCCG AGTACGAACT GATCGACCGC
ATTCACGCTG CCCGCGGCGA GGGTGTGGAT TTTATTTTGA TCAATCCGGC CGCTTTTACG
CACACCAGCG TTGCAATACG TGACGCGCTG ATGGGAGTGA GCATCCCATT CATCGAAGTG
CATTTATCAA ACGTGCACAA ACGCGAACCT TTCCGCCATC ACTCCTACTT TTCAGATGTC
GCTGTAGGAG TGATCTGTGG CCTGGGTGCC AGTGGATACC GACTGGCCCT GGAAGCCGCC
CTGGAACAAC TGGCCGCCAG TGCCAAGCCA TGA
 
Protein sequence
MATILVLHGP NLNLLGTREP GVYGTITLPQ INQDLEQRAR DAGHHLMYLQ SNAEYELIDR 
IHAARGEGVD FILINPAAFT HTSVAIRDAL MGVSIPFIEV HLSNVHKREP FRHHSYFSDV
AVGVICGLGA SGYRLALEAA LEQLAASAKP