| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4393 |
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| Symbol | |
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| ID | 3369933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5255165 |
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| End bp | 5256421 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654753 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_237461 |
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| Protein GI | 66047620 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGAGA AACTGTTTGG CGTCTCATCG CGCACGCAAG GCAAGCCTGA CGACGGGCAA
GGCCTGAAAC TGGTGCTGCA CCGTTACATC ATCGACGGCA TGGAAGAAAG CGGCAAAAGC
CTGCTCGAAG GCTCACGACC GGCCCTGGCA CAATTCGTCA TCGACAAGGT GGCCGAATAC
GTCGCACGCC TGCGGCTGGC CATCTCGCGT TACGAAATGG AGCGCCTGGC TGAAGAACTG
GTCGACGAAC TGACCGGCTT CGGCCCGCTG GAAGTGCTGC TGCGCGACAC CTCGGTGACG
GAAATTCTGG TCAACGGGCC AGGCAAGGTG TTTGTCGAGC GCGACGGCGT GCTGCACCAC
ACCGACCTGC GCTTTATCGA TTCGCACCAC GTCGAGCGCG TGATGCAACG CATCCTGGCA
CCCCTTGGGC GGCGTCTGGA CGAGTCTTCA CCGATGGTCG ACGCACGCCT GCCCGATGGC
AGCCGGGTCA ACGCGATCAT TCCGCCCATT GCGCTGGACG GCCCTTGCCT GTCGATCCGG
AAATTCCGCA AGGACATGCT CAAGAGCGCC GACCTGGTGG CCATGCAGAC CATCGATCAG
TCGATTTTCG AGTTCTTCCA GGAGGCCGTC GGCAAACGCT GCAACATTCT GGTCAGCGGC
GGCACCGGCA CGGGCAAGAC CACCATGCTC AACGTGCTGA GCCAGTTGAT CGACAGCAAT
CAGCGTCTGG TGACCATCGA GGACGTTGCC GAGCTGCAGC TCAGTCACCC GCATGTGGTG
CGCCTGGAAA CCCGCCCGCC CAACGCCGAA GGGCATGGCG AGGTGCGCGC CAGCGACCTG
ATCCGCAACT CGCTGCGGAT GCGCCCGGAC CGCATCATCC TCGGTGAGAT TCGCGGCGTC
GAAGTGCTGG ACGTATTGAC GGCGATGAAC ACCGGCCACG ACGGCTCGAT GAGTACCGTG
CACGCCAACA ATGCACAGGA TGCCCTGCTG CGTCTGGAAA CGCTGGTGGG CCTGACCGGG
CGGCTGATCC CGGAAAAGAC CCTGCGCCAG ATGGTCTGCG CGGCACTGGA TGTGATTATC
CAGCTGACGC GCCTGCCTGA CGGGCGCCGC TGTGTCAGTG AAGTGGTGGA AGTGGTCGGC
ATCCGCGATG ACATCTATGT CACCAATACC CTGTTTCGCG TTGATCGCCG CACCGGGGTC
GGTTTCATGC GCGAAGCGGC CCACGCTGCT GGCGACAAGC TGCGGCCTGG CTACTGA
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| Protein sequence | MAEKLFGVSS RTQGKPDDGQ GLKLVLHRYI IDGMEESGKS LLEGSRPALA QFVIDKVAEY
VARLRLAISR YEMERLAEEL VDELTGFGPL EVLLRDTSVT EILVNGPGKV FVERDGVLHH
TDLRFIDSHH VERVMQRILA PLGRRLDESS PMVDARLPDG SRVNAIIPPI ALDGPCLSIR
KFRKDMLKSA DLVAMQTIDQ SIFEFFQEAV GKRCNILVSG GTGTGKTTML NVLSQLIDSN
QRLVTIEDVA ELQLSHPHVV RLETRPPNAE GHGEVRASDL IRNSLRMRPD RIILGEIRGV
EVLDVLTAMN TGHDGSMSTV HANNAQDALL RLETLVGLTG RLIPEKTLRQ MVCAALDVII
QLTRLPDGRR CVSEVVEVVG IRDDIYVTNT LFRVDRRTGV GFMREAAHAA GDKLRPGY
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