| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4391 |
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| Symbol | |
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| ID | 3369931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5252728 |
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| End bp | 5253978 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637654751 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_237459 |
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| Protein GI | 66047618 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.260079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTGTT GTTCCGTGCC AGTTATAAAA CCCCGTTTGC TGGCGTTAGT CATCGCAACA
TTGTGCGCGC CAGGCGCGTG GGCCGCTTCG GGCAGTTGTG CCGGCCTTGC CGCGATGCCG
GCGGCCGTGG AAATTGACCA GGGCATTCAA CAGGAGGTGC GCTCTGCGGT GCCCATCACC
CGCATCGCCG TGGGTGATCC GAAAATCGCC GATGTGCATG TCAACGGCAC CGACGGTTTT
CTGTTGACCG GCGTCGCACA GGGGACGACC AGCCTGATGG TCTGGACCGC CTGTGCAAGC
GCGCCGCGCC AGAGCATGGT CTTCGTGCGT GGCCGGGCGA CGACCGCCAT GGTCGAGAGT
GTCACCGCGC CGTCTGCCGA TGCGCAGTTA CCCAGCCAGG TGCAGACCGA CATCCGTTTT
ATCGAAGTCA GCCGCACCAA GCTCAAGGAA GCCAGTACCT CGATCTTCGG CAAGGGCTCG
AGCAACTTTC TGTTCGGCGC GCCCGGCACG GTACCGGGCG TCAACGTCAC ACCTGGCGCT
GTGGGCGGCA TAACGCCGAG CATTCCGCTG AACAACAGCA ATTTCAATAT CGTCTGGGGC
GGTGGCAGCA GCAAGGTGCT GGGCATGATC AACGCCATGG AAAACAGCGG CTACGCCTAC
ACCCTGGCAC GCCCCAGCCT GGTCGCCCTC AACGGGCAAA GCGCGAGCTT TCTGGCCGGC
GGCGAATTCC CGGTGCCGGT GCCCAATGGT GAAGGCAACG GTATCTCCAT CGAGTACAAG
GAGTTTGGCG TGCGCCTGAC CCTGACCCCG ACTGTCGTGG GCCGGGATCG GATTCTGCTG
AAGGTCGCGC CGGAAGTCAG CGAGCTGGAT TTCTCGGCCG GCATCACCAT CGCCGGGACC
ACCGTGCCAG CGCTGAACAT CCGCCGTACC GACACCAGCA TTGCGCTTGC CGACGGCGAG
AGCTTCGTGG TCAGCGGCCT GATCAGTTCC AGCAACAGCG GTTCGGTGGA CAAGTTTCCC
GGCCTCGGCG ACATCCCGAT TCTCGGTGCC TTTTTCCGCA GCTCGCAAAT CCAGCGCGAC
GAGCGCGAAC TGCTGATGAT CGTCACTCCG CATCTGGTCC AGCCACTGGC CGCCAACGCC
CGGCTGCCGT CGCTGCCGGG TGAGGCACTG CGCACCTATG ACCCGAGCTT CCCGCGCCTG
TATTTTCTGG AAAACGGCGA TTTCGACCGC CGCGACGGGT TATCCAAATG A
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| Protein sequence | MSCCSVPVIK PRLLALVIAT LCAPGAWAAS GSCAGLAAMP AAVEIDQGIQ QEVRSAVPIT
RIAVGDPKIA DVHVNGTDGF LLTGVAQGTT SLMVWTACAS APRQSMVFVR GRATTAMVES
VTAPSADAQL PSQVQTDIRF IEVSRTKLKE ASTSIFGKGS SNFLFGAPGT VPGVNVTPGA
VGGITPSIPL NNSNFNIVWG GGSSKVLGMI NAMENSGYAY TLARPSLVAL NGQSASFLAG
GEFPVPVPNG EGNGISIEYK EFGVRLTLTP TVVGRDRILL KVAPEVSELD FSAGITIAGT
TVPALNIRRT DTSIALADGE SFVVSGLISS SNSGSVDKFP GLGDIPILGA FFRSSQIQRD
ERELLMIVTP HLVQPLAANA RLPSLPGEAL RTYDPSFPRL YFLENGDFDR RDGLSK
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