| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4387 |
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| Symbol | |
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| ID | 3369927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5248303 |
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| End bp | 5250651 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637654747 |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_237455 |
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| Protein GI | 66047614 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAACCTG AATTTCTTCT GCGCCTGCCG CGAACGTTCA AGTGGCTGGC GGGCGCGATC
ATGCTGCTGA TCGCCCTCCT CTGGCTGGCT GACCGACTCT GGCCGCTGCC ACTGCCCAGG
GACGATCTGG CTCGCGTTGT GCTGGCCGAG GACGGTACAC CACTGTGGCG CTTCGCCGAT
ACCAATGGCG TATGGCGCTA TCCGGTCAGC AACGCGCAGG TCTCGCCCTA CTACCTCGAA
GCCCTGCTGA CCTACGAAGA CCGCTGGTTC TACAGCCATC CCGGGGTCAA CCCGCTGGCG
CTGTTGCGCG CCACCTGGCA AAACCTCAGC GGTGCCCGTG TAGTCTCAGG CGGCAGCACA
CTGTCGATGC AAGTGGCGCG GTTGCTCGAT CCGCATTCAC GTACGTTATC CGGCAAGTTT
CGCCAGCTGT GGCGCACGCT GCAGCTGGAG TGGCACCTGT CCAAGGATCA GATCCTCAGT
CTGTACCTCA ATCGCGCCCC GTTCGGCGGC ACACTGCAAG GCGTCGCAGC CGCCAGTTGG
GCCTACCTGG GCAAGTCGCC GCAAAACCTG ACCCGCGCCG AGGCGGCATT GCTGGCGGTG
CTGCCACAGG CGCCTAGCCG TCTGCGTCCT GATCGTCACC CGCAGCGCGC GCAACAGGCC
CGCGATAAGG TGTTGAGACG TCTGGCCGAG TTTCAGGTGT GGCCGCGAGC AAGCGTGAAC
GAAGCACTGG AAGAGCCTTT ATGGCTGGCG CCGCGACAGG AACCGAGCCT GGCGCCGCTG
CTGGCCCGAC GCCTGAATCG ACCCAACAGC CCGCCACTGA TCCGCACCAC GCTGGACGCC
TCACTGCAAC GACGCATGGA AGACCTGCTG ATGGGCTGGC GCGCACGCCT CCCGGAGCGA
ACGTCGGCAG CGATTCTGGT GGTCGAGGCT GAGAACATGG CCGTACGCGC GTACGTGGGC
TCGGTGGACA TCAACGACGC CAAGCGTTTC GGCCACGTGG ACATGGTCAC CGCCTTGCGT
TCGCCGGGCT CGACGCTCAA GCCGTTCCTG TACGGCATGG CTATGGACGC CGGGCTGATC
CATTCCGAAT CGCTGATGCA GGATGTGCCG CGGCGCTATG GCGACTATCG ACCGGGCAAC
TTTTCGAGCG GCTTCGGCGG ACCGGTGGCA GTCAGTTCGG CGCTGTCGAT GTCCCTCAAC
CTGCCTGCCG TGCAATTGCT GGAGGTCTAC GGGCCGAAGC GCTTCGCCGC CGAACTGCGC
AATGGCGGCG TGCCCCTGAG CCTGCCGCCG CTGGCCGAGC CCAGTCTGGC ACTGATTCTT
GGTGGCGCGG GCAGTCGGTT AGAGGACTTG GTGACAGGCT ACAGCGCCTT CGCGCGCGGC
GGGCGCAGTG CCGATGTTCG ATTGCAACCG CAGGACCGAC TGCGCGAGCG GCGCATGATG
TCACCGGGCG CTGCGTGGAT CATTCGCCGC ATTCTCAGTG GTCAGTCGCG CCCGGACATC
GACCCGCGCG CCGAGCTGGT ACAGCGTCCG CAACTGGCCT GGAAAACCGG CACCAGCTAT
GGCTTCCGCG ATGCCTGGGC GATTGGCGTC GGACCGCGCT TTCTGGTCGG TGTGTGGATC
GGTCGACCGG ATGGCACACC GGTGCCAGGG CAGTTCGGGC TGGCTTCGGC AGCGCCGCTG
ATGCTTCAGG TGCACGATGT ACTGGTCAAT CGCGACAGCC AGCGCGGGAT CGCCGCACCG
ATGCAACCCG TGCCGCTGAA CGTCGGTGTA GCCGCCATCT GCTGGCCACT GGGTCAACCG
ATGAGCAAAA GCGCCCCCAA TTGCCGGCGC CAACGCTTCG CCTGGACGCT GGACGGCACC
ACGCCACCCA CCCTGCAAGC GGCCGACCAA CCGCTCGGGC TGGGTTTGCA GGAACGTGTC
TGGATCAATG CCAAGGGGTT GCGCGTCGCG GCCAATTGCC CGGACGCCCG AGCGCAGGAC
ATCGCGCTGT GGCCTGCGCC TCTGGAGCCC TGGCTGCCCA GAGCAGAGCG GCGTGATGCA
CGCCTGCCAC CCGCTGACCC GGATTGCCCG CCACAGAACC TGAACCTCGC GCCCCCGCTG
AGCATTGTCG GTGTGCGCGA AGGCGACAAC CTGCGCCTGC CTGCCGCCAG TCGTCAGGCT
TTACGCCTCA CGCTCTCGGC ACTCGGCGGC AGTGGCCATC GCTGGTGGTT TATCGATGGC
AAACCTCTGG CAGACACCGA CACCCGGCAA GACTTCACCC CCACCCTGAG CAAACCGGGG
CGTTATCAGT TAAGCGTGCT GGACGAAAGC GGTCAGACGG CGCGGGTTGA ATTCAGCGTG
GTGGAGTGA
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| Protein sequence | MKPEFLLRLP RTFKWLAGAI MLLIALLWLA DRLWPLPLPR DDLARVVLAE DGTPLWRFAD
TNGVWRYPVS NAQVSPYYLE ALLTYEDRWF YSHPGVNPLA LLRATWQNLS GARVVSGGST
LSMQVARLLD PHSRTLSGKF RQLWRTLQLE WHLSKDQILS LYLNRAPFGG TLQGVAAASW
AYLGKSPQNL TRAEAALLAV LPQAPSRLRP DRHPQRAQQA RDKVLRRLAE FQVWPRASVN
EALEEPLWLA PRQEPSLAPL LARRLNRPNS PPLIRTTLDA SLQRRMEDLL MGWRARLPER
TSAAILVVEA ENMAVRAYVG SVDINDAKRF GHVDMVTALR SPGSTLKPFL YGMAMDAGLI
HSESLMQDVP RRYGDYRPGN FSSGFGGPVA VSSALSMSLN LPAVQLLEVY GPKRFAAELR
NGGVPLSLPP LAEPSLALIL GGAGSRLEDL VTGYSAFARG GRSADVRLQP QDRLRERRMM
SPGAAWIIRR ILSGQSRPDI DPRAELVQRP QLAWKTGTSY GFRDAWAIGV GPRFLVGVWI
GRPDGTPVPG QFGLASAAPL MLQVHDVLVN RDSQRGIAAP MQPVPLNVGV AAICWPLGQP
MSKSAPNCRR QRFAWTLDGT TPPTLQAADQ PLGLGLQERV WINAKGLRVA ANCPDARAQD
IALWPAPLEP WLPRAERRDA RLPPADPDCP PQNLNLAPPL SIVGVREGDN LRLPAASRQA
LRLTLSALGG SGHRWWFIDG KPLADTDTRQ DFTPTLSKPG RYQLSVLDES GQTARVEFSV
VE
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