Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4384 |
Symbol | |
ID | 3369924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5241000 |
End bp | 5242340 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637654744 |
Product | multi anti extrusion protein MatE |
Protein accession | YP_237452 |
Protein GI | 66047611 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACGT TGCTCACTGA CTGGCGTCAT CGCTCAACCC ATCGTCGTGT CTGGGCGCTG GCGACGCCGA TGATTCTGTC GAATATTTCC GTGCCGCTGG TGGCGCTGGT CGACAGTGCG GTGATCGGTC ATTTACCCCA CGCCCATCAG TTGGGCGCCG TGGCGGTGGG CGCGACGCTG TATACCTTTC TCGCCTGGGT CATGGGCTTT CTGCGCATGG GCACCACCGG GTTTGCCGCG CAGGCGGCAG GGCGCAGTGA CAGCGCTGCG TTGCGGCGGA TTCTGTTGCA GGGGCTGCTG CTGGCTGTCG GGCTGGCGTT GTTGCTGGGT GTGATCGCCT TGCCGTTCAG CCATCTGGCG CTGACGATGA TGCAGCCGTC TGCCGATCTG CAGCAAATGA CCCTGGATTT CTTCCATACC CGACTGTTCG GCCTGCCTGC GGCGCTGGCC AGTTATGCGC TGGTCGGCTG GTTTCTGGGT GCGCAGAACG CTCGGGCGCC ACTGGCGATT CTGCTGGTGA CCAATGCCGT CAACATCGTG CTCAATCTGT GGTTCGTCAT GGGGCTGGAC TGGGGCGTGG TCGGCTCGGC GCGTGCTTCG GTACTCGCGG AGTGGACCGG CGTGGTGCTC GGTCTGCTGC TGGCACGCAA CACCTTGCGC GCCTGGCCGG GCCGGATTGT CTGGTCGGCC TTGCGGCTGT GGAGCAACTG GCGGCCCTTA CTGGCCGTCA ACCGGGACAT CTTTCTGCGC ACGCTGGCGC TGCAATCGGT GATGTTTCTG ATCACCGTGC AGGGCGCTCG CCTGGGGGAT GCGACGGTTG CCGCCAATGC CTTGCTGCTC AATGGCCTGC TGTTGACTGC CCATGCCCTG GATGGGCTGG CGCATGCGGT CGAAGCGCTG TGCGGGCATG CCATCGGCGC GCGTGACCGG GATACGTTGC GCCGCTCTCT GGTGGTCGCG GGGGGCTGGT CACTGATTTC CAGCGTAGTG TTTGCGCTGT TCTTTCTGGT GGCTGGGCAG GGCTTCGTCA GCCTGCAGAC CGATATCCCG GAAGTGCGCG CCACCGCGAT GATGTATCTG CCGTATCTGG CGCTGATGCC ATTGTTGGCC GTGTGGAGCT ACCTGCTGGA CGGCCTGTTC ATCGGTGCCA CCCGTGCGCG GGAAATGCGT AACGCGATGC TGTTCAGCGC AGCGGGCATC GCGCCATTGG CTTATCTGGC TTCCAGCCAC GGCAACCACG CCTTATGGCT GACGTTCCTG GCTTTTACCC TGCTGCGCGG CCTGAGCCTG GGGACCATTG CCTGGCGGCT GACACGCAGG GACGGCTGGT TCGTTCACTG A
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Protein sequence | MSTLLTDWRH RSTHRRVWAL ATPMILSNIS VPLVALVDSA VIGHLPHAHQ LGAVAVGATL YTFLAWVMGF LRMGTTGFAA QAAGRSDSAA LRRILLQGLL LAVGLALLLG VIALPFSHLA LTMMQPSADL QQMTLDFFHT RLFGLPAALA SYALVGWFLG AQNARAPLAI LLVTNAVNIV LNLWFVMGLD WGVVGSARAS VLAEWTGVVL GLLLARNTLR AWPGRIVWSA LRLWSNWRPL LAVNRDIFLR TLALQSVMFL ITVQGARLGD ATVAANALLL NGLLLTAHAL DGLAHAVEAL CGHAIGARDR DTLRRSLVVA GGWSLISSVV FALFFLVAGQ GFVSLQTDIP EVRATAMMYL PYLALMPLLA VWSYLLDGLF IGATRAREMR NAMLFSAAGI APLAYLASSH GNHALWLTFL AFTLLRGLSL GTIAWRLTRR DGWFVH
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