| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4381 |
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| Symbol | |
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| ID | 3369921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5236745 |
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| End bp | 5238658 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637654741 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_237449 |
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| Protein GI | 66047608 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTAA GACGCACACG TAAAGACGAT GGCAGCCAAT GGACCGTTGC GGACAGCCGC
AGCGTTTACG GCATTCGCCA TTGGGGCGCG GGTTATTTTG CTATCAACGA AGCGGGACGC
GTTGAAGTCC GTCCCAACGG GCCGGACAGC TCGCCCATCG ATCTTTACGA ACAGGTCGAC
AATTTGCGCA AGAGCGGCCT GTCGCTGCCC TTGCTGGTGC GCTTCCCCGA CATTCTGCAG
GACCGTGTGC GTCAGCTGAC CGGCGCGTTC GACAGCAACA TCGCGCGCCT GGAATACCAG
AGCAAGTACA CCGCGCTGTA CCCGATCAAG GTCAACCAGC AGGAAGCGGT GGTGGAAAAC
ATCATCGCCA CGCAGAACGT CTCCATCGGC CTGGAAGCGG GCTCCAAGCC TGAGCTGATG
GCGGTGCTGG CACTGGCGCC CAAAGGCGGC ACCATCGTCT GCAACGGTTA CAAGGACCGT
GAGTTCATCC GTCTGGCGCT GATGGGCCAG AAGCTGGGCC ACAACGTGTT CATCGTCATC
GAGAAAGAGT CCGAAGTCGA ACTGGTGATC GAAGAAGCCG CCGAACTGAA GGTCGCTCCC
CAGGTTGGCC TGCGCGTACG CCTCTCCTCC CTGGCGTCGA GCAAATGGGC GGATACCGGT
GGCGAGAAAT CCAAGTTCGG TCTGTCGGCT GCGCAGTTGC TGTCGGTGGT CGAGCGTTTC
CGCAAGGCCG GCCTGGATCA GGGCATTCGC CTGCTGCACT TCCACATGGG CTCGCAGATC
GCCAACCTGG CCGACTATCA GCACGGTTTC AAGGAGGCGA TCCGTTACTA CGGCGAACTG
CGCAAGCTCG GCCTGCCGGT GGATTACATC GATGTCGGGG GTGGTCTGGG GGTCGATTAC
GACGGTACGC ACTCGCGCAA CGCCAGCTCG ATCAACTACG ACATGGACGA CTATGCAGGC
GTCGTGGTCG GCATGCTCAA GGAATTCTGC GACGCGCAAA GCCTGCCGCA CCCGCATATC
TTCTCGGAAA GCGGCCGCTC GCTGACCGCC CACCACGCCA TGCTGGTGGT GCAGGTGACC
GACGTCGAAA AACACAACGA CGAAGTCCCG GAAATCGCCG ACAAGGCCAG CCTGCCGGAA
ACCGTGCAAT GGCTGGTCGA CCTGCTGGGC CCGACTGACA TCGAGATGGT CACCGAAACC
TACTGGCGCG CCACGCACTA CATGAGCGAC ATCGCGGCCC AGTACGCCGA TGGCAAGATC
AGCCTGTCGG AAAAAGCGCT GGGCGAGCAA TGCTACTTCG CCGTCTGCCG TCGCCTGTAC
AACTCGCTGA AAGCCCGTCA ACGCTCGCAT CGTCAGGTGC TGGACGAGCT CAACGACAAG
CTGGCCGACA AGTACATCTG CAACTTCTCG GTGTTCCAGA GCCTGCCGGA CACCTGGGCC
ATTGGCCAGG TGCTGCCGAT TCTGCCCCTG CACCGCCTGA ATGAAGAGCC GGTGCGCCGC
GCCGTGCTGC AGGACCTGAC CTGCGATTCG GACGGCAAGA TCAAGCAGTA CGTCGACGAG
CAGAGCATCG AGACCAGCAT GCCGGTGCAT TCGCTGAACG AAGGCGAAGA CTATCTGCTG
GGGATCTTCC TGGTGGGCGC CTACCAGGAA ATTCTCGGCG ACATGCACAA CCTGTTCGGT
GATACCGATT CGGTGAACAT CTACCAGAAC CCGGACGGCA GCGTTTACCA CGCAGGCATC
GAAACCCACG ACACCATCGA AGACATGCTG CGCTACGTGC ACCTGTCGCC GGAAGAACTG
ATGACCCATT ACCGGGACAA GGTCGCCAGC GCCAAGATCA CCCCACGCGA GCGCACCTAC
TTCCTCGATG CCTTGCGCCT GGGGCTGACC CGCTCGTCGT ACCTGTCGTC CTGA
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| Protein sequence | MSVRRTRKDD GSQWTVADSR SVYGIRHWGA GYFAINEAGR VEVRPNGPDS SPIDLYEQVD
NLRKSGLSLP LLVRFPDILQ DRVRQLTGAF DSNIARLEYQ SKYTALYPIK VNQQEAVVEN
IIATQNVSIG LEAGSKPELM AVLALAPKGG TIVCNGYKDR EFIRLALMGQ KLGHNVFIVI
EKESEVELVI EEAAELKVAP QVGLRVRLSS LASSKWADTG GEKSKFGLSA AQLLSVVERF
RKAGLDQGIR LLHFHMGSQI ANLADYQHGF KEAIRYYGEL RKLGLPVDYI DVGGGLGVDY
DGTHSRNASS INYDMDDYAG VVVGMLKEFC DAQSLPHPHI FSESGRSLTA HHAMLVVQVT
DVEKHNDEVP EIADKASLPE TVQWLVDLLG PTDIEMVTET YWRATHYMSD IAAQYADGKI
SLSEKALGEQ CYFAVCRRLY NSLKARQRSH RQVLDELNDK LADKYICNFS VFQSLPDTWA
IGQVLPILPL HRLNEEPVRR AVLQDLTCDS DGKIKQYVDE QSIETSMPVH SLNEGEDYLL
GIFLVGAYQE ILGDMHNLFG DTDSVNIYQN PDGSVYHAGI ETHDTIEDML RYVHLSPEEL
MTHYRDKVAS AKITPRERTY FLDALRLGLT RSSYLSS
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