Gene Psyr_4365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4365 
Symbol 
ID3369905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5218555 
End bp5220450 
Gene Length1896 bp 
Protein Length631 aa 
Translation table11 
GC content62% 
IMG OID637654725 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_237433 
Protein GI66047592 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.710659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAC CGATCCGCCT CAAAGACCAC GAAAAGGACG CACGCCTGGT GCGCGGCAGG 
GTCGTGTTCG GTGCTGTGGC GGTGGTGTTG CTGGTGTGCG TGCTGATTGC CCGGTTGTAT
TACCTGCAGG TCATCCAGTA CGAGTATCAC TCCACGCTTT CGGAAAATAA CCGCGTTCAC
GTTCAGCCGA TTCCGCCCAG CCGCGGGTTG ATCTACGACC GTAACGGCGT TGTGGTCGCC
GATAACCGGC CCAGTTTCAG TCTCAGCATG ACCCGTGAGC GCGCCGGCGA GTGGTCCAGC
GTGCTCGACA CCATTGTCGA GATCCTGCAG CTCACCCCCG ACGACCGCAT CATCTTCGAA
AAGCGCATGA AGCAGGGGCG TCGGCCATTC GAGCCGGTGC CCATCCTGTT CGAGCTGAGC
GAGGAGCAGA TCGCCCTGAT CGCCGTCAAC CAGTTCCGCC TGCCGGGCGT CGAAGTGGTT
GCGCAACTGG TCAGGCATTA CCCGCAAGGG CCGCACTTTG CCCACTCGGT CGGCTACATG
GGGCGCATCA ACGAGAAAGA GCTCAAGAGC CTCGACCCGA TCAATTACAG CGGCACGCAC
CATATCGGCA AGACCGGCAT CGAGCGCTTT TACGAGCCCG AGCTGCATGG TCAGGTCGGC
TACGAAGAGG TCGAGACCAA CGCCCGTGGT CGCGTATTGC GTGTGCTCAA GCGCACCGAC
CCGATCCCCG GCAAGGACAT CGTCCTGAGC CTGGACATCA AGCTTCAGGA AGCCGCCGAA
GCGGCACTGG GCGGGCGTCG TGGTGCGGTC GTCGCACTGG ACCCGGCCAC CGGGGAAGTG
CTGGCGATGG TCAGTGCGCC GAGCTTCGAT CCGAATCTGT TTGTCACCGG CATCAGCTTC
AAGGCCTATG CCGAGCTGCG CGATTCCATC GACCGGCCGC TGTTCAACCG CATCCTGCGA
GGGCTGTACC CGCCGGGCTC GACCATCAAG CCCGCAGTGG CGATTGCCGG GCTGGATACC
GGTGCGGTGA CGCCTGGCTC GCGGGTATTC GATCCGGGCT ATTACCAACT GCCCAATTAC
GATCACAAGT ACCGCAACTG GAACCGCACC GGCGATGGCT GGGTCGATCT GGATACGGCG
ATCATGCGTT CAAATGACAC GTACTTCTAC GATCTGGCAC ACAAGGTGGG CATTGATCGA
CTCGCTACCT ACATGAACAA GTTCGGTATC GGGCAGAAGG TCTCGCTGGA CATGTTCGAA
GAATCTCCCG GCCTGATGCC GTCCCGTGAG TGGAAGCGCG CCACGCGCCG GCAAGCCTGG
TTCCCCGGCG AAACCCTGAT CCTCGGCATC GGTCAGGGCT ACATGCAGGC GACGCCTTTG
CAACTGGCCC AGGCGACCGC GCTGGTGGCC AACAAGGGTG TATGGAATCG GCCGCATCTG
GCCAGAACCA TCGAAGGCAA GGCGCCCGTG GATGAAAATC CGATGCCGGA CATCGTGCTG
CGCGACCCGG CCAACTGGGG ACGCGTCAAC CATGGCATGC AGGAAGTGAT GCACGGCGCG
CGCGGTACGG CGCGCAAGGC CGCCATTGGT GCGCAGTACC GGATTGCCGG CAAGAGCGGT
ACTGCCCAGG TGGTGGCCAT CAAGCAGGGC GAGAAATACG ACCGCACCAA GGTGCAGGAA
CGCCACCGCG ACCACGCCTT GTTCGTCGGC TTCGCCCCGG CTGATAACCC GAAAATCGTT
GTTGCAGTGA TGGTCGAGAA CGGCGAGTCC GGTTCCGGCG TTGCTGCACC CGTCGTGCGT
CAGGTCCTGG ACGCCTGGCT GCTCGACGAA AACGGCCATC TCAAACCCGA GTACGCCGGT
TCCCTGAATC TGGAGGCTGC GGCCCGTGAA GAGTAA
 
Protein sequence
MSQPIRLKDH EKDARLVRGR VVFGAVAVVL LVCVLIARLY YLQVIQYEYH STLSENNRVH 
VQPIPPSRGL IYDRNGVVVA DNRPSFSLSM TRERAGEWSS VLDTIVEILQ LTPDDRIIFE
KRMKQGRRPF EPVPILFELS EEQIALIAVN QFRLPGVEVV AQLVRHYPQG PHFAHSVGYM
GRINEKELKS LDPINYSGTH HIGKTGIERF YEPELHGQVG YEEVETNARG RVLRVLKRTD
PIPGKDIVLS LDIKLQEAAE AALGGRRGAV VALDPATGEV LAMVSAPSFD PNLFVTGISF
KAYAELRDSI DRPLFNRILR GLYPPGSTIK PAVAIAGLDT GAVTPGSRVF DPGYYQLPNY
DHKYRNWNRT GDGWVDLDTA IMRSNDTYFY DLAHKVGIDR LATYMNKFGI GQKVSLDMFE
ESPGLMPSRE WKRATRRQAW FPGETLILGI GQGYMQATPL QLAQATALVA NKGVWNRPHL
ARTIEGKAPV DENPMPDIVL RDPANWGRVN HGMQEVMHGA RGTARKAAIG AQYRIAGKSG
TAQVVAIKQG EKYDRTKVQE RHRDHALFVG FAPADNPKIV VAVMVENGES GSGVAAPVVR
QVLDAWLLDE NGHLKPEYAG SLNLEAAARE E