Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4359 |
Symbol | lipB |
ID | 3369899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5212943 |
End bp | 5213599 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637654719 |
Product | lipoate-protein ligase B |
Protein accession | YP_237427 |
Protein GI | 66047586 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0321] Lipoate-protein ligase B |
TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.100426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCTA CGCTGGGTTT TCGTGATCTG GGCCTGATCG ATTACGAAAC CGCCTGGCAC GCCATGAAGC GCTTTACCGA CGAGCGTGGC CGCGAGGCTG CCGATGAGGT CTGGCTGGTT CAGCATCCGC CGGTTTTCAC TCAGGGACAG TCCGGCAAGG CCGAGCATTT GCTGCTGCCG GGTAATATTC CTGTCGTACA GGTCGATCGT GGCGGCCAAG TGACTTATCA TGGTCCGGGC CAACTGGTGG CTTATCTGAT GCTGGACGTC AGGCGCCTTG GTTTCGGCGT TCGCGATCTG GTCACCCGGA TCGAGAACAC CCTCATCGCC TTGCTCGCCG ACTACGGCGT CAAGGCAGCA GCCAAGGCTG ATGCCCCTGG CGTATACGTC GACGGCGCGA AGATAGCGTC GCTCGGTCTG CGCATTCGCA ACGGCTGCTC GTTTCATGGT CTGGCGTTGA ACGTCGACAT GGACCTTGAG CCGTTCCGCC GCATCAACCC GTGCGGATAC GCCGGGCTGG CCATGACCCA ACTGAGCGAT CAGGCAGGGC AGATAGAATT TTCCGAGGTA AGTGCCCGAC TGCGTGCGCA GCTCGTCAAA CACCTCGACT ACGCTGAGCA GGCGACCCTT ACGGGCGGAA TAAACCATTA TGACTGA
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Protein sequence | MAATLGFRDL GLIDYETAWH AMKRFTDERG REAADEVWLV QHPPVFTQGQ SGKAEHLLLP GNIPVVQVDR GGQVTYHGPG QLVAYLMLDV RRLGFGVRDL VTRIENTLIA LLADYGVKAA AKADAPGVYV DGAKIASLGL RIRNGCSFHG LALNVDMDLE PFRRINPCGY AGLAMTQLSD QAGQIEFSEV SARLRAQLVK HLDYAEQATL TGGINHYD
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