Gene Psyr_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4348 
Symbol 
ID3369888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5201324 
End bp5202166 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content59% 
IMG OID637654708 
ProductCBS:transporter-associated region 
Protein accessionYP_237416 
Protein GI66047575 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4535] Putative Mg2+ and Co2+ transporter CorC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG ACCGATCGAG CAACGGGCAA AAGTCATGGT TGGGTAAACT GACCCAGGCC 
TTTGTCCATG AGCCGAAAAA CCGCCAGGAG CTGCTTGAGC TGCTGCGCGA AGCCCACCAG
AACAAACTGC TGGACAGCGA AGCGCTGGCC ATCGTCGAGG GCGCCATTCA AGTGGCTGAC
CTGCAAGTGC GCGACATCAT GGTGCCGCGC TCGCAGATGA TCAGCATCAA GGCGACCCAG
ACACCCCGTG AATTTCTGCC GGCGGTCATC GATGCTGCGC ACTCGCGCTA TCCGGTGATC
GGCGAGAGCC ACGATGACGT GCTCGGTGTG CTGCTGGCCA AGGATCTGCT GCCGCTGATC
CTCAAGGCCG ACGGCGACAG TGATGACGTC AAGAAGCTGC TGCGTCCGGC CACCTTCGTG
CCCGAATCCA AGCGTCTCAA CGTGCTGCTG CGCGAGTTTC GCGCCAACCA CAACCACATG
GCCATCGTCA TTGACGAATA CGGCGGCGTG GCAGGTCTGG TGACCATCGA AGACGTGCTG
GAACAGATCG TCGGCGATAT CGAAGACGAG CATGACGTCG AGGAAGACAG CTACATCAAA
CCGCTGCCCA GCGGCGACTT CCTGGTCAAG GCCCTTACCC CGGTCGAGAA TTTCAACGAA
TTCTTCGACA GCACGTTCTC GGACGACGAG TTCGATACTG TGGGCGGTCT GGTGATGAAT
GCCTTCGGCC ATCTGCCCAA GCGCAACGAA ATCACTGAAA TCGGTGCTTA TCGTTTCCGC
ATCCTGAGCG CTGACAGCCG TCGCATTCAT TTGCTGCGCG TGACGCCCAT TTCACGTCCG
TAA
 
Protein sequence
MSEDRSSNGQ KSWLGKLTQA FVHEPKNRQE LLELLREAHQ NKLLDSEALA IVEGAIQVAD 
LQVRDIMVPR SQMISIKATQ TPREFLPAVI DAAHSRYPVI GESHDDVLGV LLAKDLLPLI
LKADGDSDDV KKLLRPATFV PESKRLNVLL REFRANHNHM AIVIDEYGGV AGLVTIEDVL
EQIVGDIEDE HDVEEDSYIK PLPSGDFLVK ALTPVENFNE FFDSTFSDDE FDTVGGLVMN
AFGHLPKRNE ITEIGAYRFR ILSADSRRIH LLRVTPISRP