| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4337 |
|---|
| Symbol | |
|---|
| ID | 3369877 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 5188303 |
|---|
| End bp | 5189766 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637654697 |
|---|
| Product | AMP nucleosidase |
|---|
| Protein accession | YP_237405 |
|---|
| Protein GI | 66047564 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.298005 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAAG CCTTTGTTGT TGTCGACACC GCCGAGCAGG CTGTAGAACG GCTCGCCGAG
CTGCATGAAC GCGCTACCAG TGCGTTGAGT CAGGCGCTCA AGCGCTACCT GAAAGACCGC
GTCGAACCCA CCGCCGAAGA GCGCGCGCAA TTCAGCTACC CGGAACTGCG CCTGATCTAC
AAATGCCAGG GCGAAGTGCC GGTGACCACC CGTGCCTACG CCAAGGTGCA GCTGCCGGGC
ACCTACAGCG TTACCGTCAC GCAGCCCAAA GCCTTCAAAA AGTACCTGCT CGAACAGCTC
GTTCCGCTGA TGAACGATTT CACCGTGACG GTCGAAGTCG GCATGAGCGA GCAGAGCATT
CCTTATCCTT ACGTGGTCGA GCAGGGCGAT GAACTGGCCG GCACGGGCGT CACCGCTGCG
GCGCTGGCGC GGGTGTTCCC GAGTACCGAC CTGTCGGCCG CCACCGATGG CATTGCCGAC
GGCCTGTATG ACTGGGCCAA TGTCGACCCG CTGCCACTGG CGCTGTTCGA CGCTGCGCGG
GTGGATTTCT CGCTGCGCCG TCTGGTGCAT TACACCGGCA GCGACTGGCG CCACGTACAG
CCGTGGATTC TGCTGACCAA CTATCACCGC TATGTCGACC AGTTCATTCT GCACGGCCTG
GAAAAGCTTC GCGAAGACCC GCGTTTCGTG CGCATGGTCC TGCCGGGTAA CGTGGTAGTC
GACAAGAGCA TGGGCCAGGA CGAAGCCCAG GCCATCGTCG CCAGCGTGGT CTGGCACCGC
TATCAGATGC CGGCCTACCA CCTGATCGCC GAAGACGGTC ATGGCGTGAC GCTGGTCAAC
ATCGGCGTCG GCCCGTCCAA TGCCAAGAAC ATCACCGATC ACCTCGCTGT ACTGCGTCCG
CATTGCTGGC TGATGATCGG TCACTGCGGT GGCCTGCGTC AGTCGCAGAC CATCGGCGAT
TACGTGCTGG CCCACGCCTA CATGCGTCGC GACGGGATTC TCGACCGTGT GCTGCCGCCG
CATATCCCGA TTCCGGCCCT GGCCGAAGTG CAGCTGGCCC TGCAGGAGTC GGCTGCGCAG
ATTACCGGCG AACGCGGCGA AGAGCTCAAG AAGCGCCTGC GCACCGGCAC GGTGTTGACC
TATGACGACC GTAACTGGGA ACTGCGCTGG GCGCAGGAAC GTCCGCTGAT CAACCTGTCG
CGCGCAGTGG CGGTCGACAT GGAAAGCGGC ACCATCGCCG CTCAGGGTTA TCGCCTGCGT
GTGCCTTACG GCACCTTGCT GTGCGTATCC GACAAGCCGT TGCACAGCGA AATCAAGCTG
CCGGGTTCGG CGAATGCGTT CTACGAACGT GCGGTGAGCC AGCACTTGAA GATCGGCATC
GCTGCGCTGG ACCTGCTGCG CACCGAGCTG AACTCGCTGC ACTCACGCAA ATTGCGCAGC
TTCGACGAGC CGCCATTCCG TTGA
|
|---|
| Protein sequence | MTQAFVVVDT AEQAVERLAE LHERATSALS QALKRYLKDR VEPTAEERAQ FSYPELRLIY
KCQGEVPVTT RAYAKVQLPG TYSVTVTQPK AFKKYLLEQL VPLMNDFTVT VEVGMSEQSI
PYPYVVEQGD ELAGTGVTAA ALARVFPSTD LSAATDGIAD GLYDWANVDP LPLALFDAAR
VDFSLRRLVH YTGSDWRHVQ PWILLTNYHR YVDQFILHGL EKLREDPRFV RMVLPGNVVV
DKSMGQDEAQ AIVASVVWHR YQMPAYHLIA EDGHGVTLVN IGVGPSNAKN ITDHLAVLRP
HCWLMIGHCG GLRQSQTIGD YVLAHAYMRR DGILDRVLPP HIPIPALAEV QLALQESAAQ
ITGERGEELK KRLRTGTVLT YDDRNWELRW AQERPLINLS RAVAVDMESG TIAAQGYRLR
VPYGTLLCVS DKPLHSEIKL PGSANAFYER AVSQHLKIGI AALDLLRTEL NSLHSRKLRS
FDEPPFR
|
|---|
| |