Gene Psyr_4333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4333 
Symbol 
ID3369873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5184638 
End bp5185531 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content62% 
IMG OID637654693 
Productcation efflux protein 
Protein accessionYP_237401 
Protein GI66047560 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0053] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA CTGCCGAACA TTCCCGACTG CTGCGTCTGG CGACACGGGC CTCGCTGGCG 
GTTGCCACGA CGCTGATCCT GGCCAAGGGC GTTGCCTGGT GGCTGAGCGG CTCGGTGAGC
CTGCTGGCCG GTCTCACCGA CTCGCTGCTG GATGGCGCAG CCTCGTTCCT CAACCTGCTG
GCGGTGCACT ATGCACTGAG GCCTGCCGAT GACGATCATC GCTATGGTCA CGGCAAGGCG
GAAGCGCTGT CGGGCATGGC GCAGGCGTTG TTCATCACCG TCAGTGGTGT GCTGATTGCC
GTTCAGGCGG TCGAGCGCAT TCAGAACCCG GAACCGCTGG GCGCGCCGCT GCTGGGCATG
GTCGTGATGG TGATTTCCAT CGCGCTGACG ATCGCACTGC TCACCCTGCA ATACCGGGTG
ATCAAGGCGA CCGGCTCGGC AGCGATCCGC GCTGATTCGC TGCACTACCG TTCAGACCTG
CTGCTTAACG CCAGCATCCT GGTGGCGCTG ACGCTGGCGT ATTTCGGCTG GCAGCAGCTG
GACGCGTATT TTGGTCTGGG CATCGCGCTG TATATTTTGT GGAGCGCCTT TCAAATCGCC
CGCGAAACCA TATCGGTGCT CATGGATGCG GAGTTGCCCG CCGATGTCAG CACTCAAATG
CTGGCATTGG CATGCGAAGT GCCGGGCGTG CTCGGTGCGC ATGATCTGCG TACACGAATC
TCCGGCAATC ACTGGTTTGT GCAGTTGCAC CTGGAGCTGC CGGGCAGCCT GACGCTGTCG
GTCGCCCACG CCATTTGTGA TCAGGTGGCT GACGCCATTC ACAAGCAATT CCCGAAGGCC
GAGGTGCTGG TACACGCCGA CCCTCAGGAA GTCGTCAAAC AGGCCAGTGC CTGA
 
Protein sequence
MSTTAEHSRL LRLATRASLA VATTLILAKG VAWWLSGSVS LLAGLTDSLL DGAASFLNLL 
AVHYALRPAD DDHRYGHGKA EALSGMAQAL FITVSGVLIA VQAVERIQNP EPLGAPLLGM
VVMVISIALT IALLTLQYRV IKATGSAAIR ADSLHYRSDL LLNASILVAL TLAYFGWQQL
DAYFGLGIAL YILWSAFQIA RETISVLMDA ELPADVSTQM LALACEVPGV LGAHDLRTRI
SGNHWFVQLH LELPGSLTLS VAHAICDQVA DAIHKQFPKA EVLVHADPQE VVKQASA