Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4313 |
Symbol | |
ID | 3369853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5147125 |
End bp | 5154306 |
Gene Length | 7182 bp |
Protein Length | 2393 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637654673 |
Product | beta-ketoacyl synthase |
Protein accession | YP_237381 |
Protein GI | 66047540 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3321] Polyketide synthase modules and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.415713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAACT CCAATGAGAT TGCTAACTTT CAGCGTTACA TTATTGATCA ACTCAAAGCG GGTCGTATTA CTAAAGAGCA AGCGGTTCAG GCGCTGGCCA AAACCGACGC CACCGGGGGC AGTATGCGTG AAGAGCAGTC CGGGCCGCCG GGCAGTACGC GTTATGTGCC GGTGTGGCGC GATGCGCCGC TTGGGCGCGC GCTCGATGTG GCTCAGGCTC ACGAACAGCA TTGCGTGGTG GTCGTAACGG AGCACGGTCA TGAGCGGTTG GTGGATACCT TGAAAGCCCG CCTGGATCAA CGCCTGCTGG CCCGGATGAC GGTAGTGTTG GCTCCCGAAG AGGCGGCCGC CAAAGGCACG CTTGCCGACC AGATGAGCGG TTTGGCCAGT GCGATGATCC TCGACGTTTT CCTCAGTTTG AAGGCGCAGG TCACGGCCAT TTTGCAGCAT GGTAAAGGCC GGAAAAGCTC GGCGGATACG CTGCTCCAGG TGTTTTTTCT GAGGCCCGAT AGTTACGCTG AAGACAAAGT AGCGCACGAA TCTGTGTATG TCGGAGTGGA AGCGGCTATT TCAGCCATGC TGAAAACCCT GAATAAGGAG CACCCGAGCA TTACCACTCA ACTGGTGGCG CTTGATGAAG CCTCCTTGGG TCAGTTAAGC CAAAATAGCC TGGCCGAGGA ACAGCACAGT CACGCGGCGT ATGTGCGCTA CCTCAAGAAT GTCCGTTATG TTCAGGTGTT TGAAACGCTC AGTGACCGTT CTGATGGTGC GTCGTTGCAA AGCTTTATAA AAACCGATGC GAGTTATCTG ATTATAGGTG GCGTAGGCGG TATTGGTTTG CACTTGGCAG ATTACATTTT GCGCCAGGGG CAGCAGGCCC GCGTCGTATT GACCGGGCGC CGCAGTGAAG CCGATCTGCA AAGTAATACG CCGTACCTGC AATTGGTAAA CACCTACGGA AAGTCCCGGG TTTCCTATCT CACGGCGAAC GCGGCGAGCT ACTCGGACCT CAAGTCGCTG TTGATCAAGG TCGTCGCCTC CCATCACCTC GAAGGGATTT TCCACTGCGC CGGCACGTTG AATGACAGTT TTCTGGTCAA CAAAACCGTC GAGCAGTTTG AAAATACCCT GGAAGCCAAA GTCAGTGGCA GCCTCCATCT GATTCAGGCT GCAAACGACG TCAGTCAACA GACTGAAACG GGCTTTGACT TCATTCTATT TTGCTCCTCT TGTGCAGGCC AGTTAGGTTT TGTCGGCCAG ATCGACTATG CGGCCGGCAA TGGATTCATT GATGGTTTCA GCGACGCTCG AAACAAGGTC GGGCGTAACG GCTTTGATCG CCTGTTGTCG GTGAACTGGC CGCTCTGGGA AAACGCCGGT ATGGGTGTTG ACCAGCAGGC GCTGAAAGAA CTCCACGTCG AGTACGGTCT GTTGCCGTTG CCGGTCGATG TGGCCCTCAA TCACGTGAAT ACGTTGTTAC TGGCCGCCGA TACCCACCAT GTTCTGGTGA CCTATGGCGA TCCGGTGAAA ATTGATAGCC AGTACGTTAA CGCTAAACCA CAGCGGAACC TGCAAACCCC GGCGCTCAGT CAGCAAACGG CTCAAGCAGC CAGCGGGAAG GGCGCAGTGA CATCGGTTGA GACTGCCTAT GATCCATTGG TCGCTCACCT CAAACAGTTG ATCTCCAGCG TCCTGAAGCT GGAGACAAGC AAACTCGACA CCTTCGAGCC GTTGCAAAGC TACGGCCTCG ACTCGTTTTC CATCATGCGG ATCAATCAGG CGTTGAGTGA GCATTTCTCT CGACTGTCGA AAACGCTGCT GTACGAAGTG GAATCCATTC ATGACCTGGC CACCACACTG AGCCAGTTGC AACCCGACGC GGTGCAGGCG TGGCTCGGCG CGGTTGCCCC GGCAGCGAGC CAACAGGCTC CGCAAGCCTC TGCCCGTCAG GACGCTCAGC CGCGTCCGGC AGTGCCCCGC GCAGTGGATG CGCAGGCCGG TGATGCGGTC GCCATTATTG GTATTAACGC GCAGTTTCCG GGAGCGGCGA ATATCGAAGC GTTCTGGGAG CTGTTGCGCA ACGGCGTGAA CGCGGTGACC GAGATTCCTG AGTCGCGCTG GTCCCTGGAA GACTTCTATG CCACGGACAA AATCGAGGCC ATCAGAGACG GTAAATCCTA CTGCAAGCAA GGCGGGTTTC TTGAACAGGC TTATGATTTC GATGAGCAGT TTTTCAAGCT CTCACCACGA GAAATCCTCG CCATGGATCC GCAGGAGCGG CTGTTTATGC AGTCTTGCTG GCGTGCCCTG GAGGACTCTG GTTACACCAA AGATAAAATC AAGCAGCAGT ATGACGGCGA CGTTGGTGTC TACGTCGGCA TTACCAAGAC TGGCTTCAAT CTCTACGGCC CGGCACTCTG GAATCAAGAC GAACGCACGA TTCCGACGAC CTCGTTCAGT TCTGTCGCCA GCCGTATTTC TTATCTCTTC GACCTCAATG GGCCCAGCAT GCCCATCGAC ACCATGTGTT CATCGTCGCT GGTGGCGATT CATGAGGCGG TCCATAGTCT CAAGGCTGGG CGTTGCCAGA TGGCGATTGT CGGTGGCGTG AACCTGTATC TGCACCCCGC AAGCTATGTA CAACTCTGTG CGTCCAGCAT GCTGTCGCAA AAAGGTCAGT GCCACAGTTT TGGCGACCAG GCGGACGGCT TTGTACCGGG TGAAGGTGTC GCGACGCTTA TTCTGAAGCC GCTTCGGCAG GCCCAGGCAG ACGGCGACCG GATTTACGCA ACAATCAAAG GCTCGGCGGT CAATCATGGT GGCGCCGCCA AAGGCTACAC CGTGCCGAAC CCCAAGGCGC AAACGGCGGT GATCGAGAAA GCCCTGAACA GCGCCAATAT CACAGCGGGC GAACTCAGCT ACATCGAGGC TCACGGCACC GGGACGGAAC TCGGTGACCC CATCGAGTTG AACGCACTCA AAGCCTGTTT CTCAGGTAAT GACCTGCCTG AGTCTTCCTG CGCGATTGGC TCGGTAAAAA GCAATATCGG CCACCTGGAA GCCGCCGCCG GTCTGGCCGG TGTGATCAAA GTGGTGCTGC AGATGCAGCA CCGGGTCCTG GTACCCAGCC TGCACGCACA GACGATCAAT CCTAACTTGG AGTTCGACCA GTCGCCGTTC TATTTGCAGC GGGAGCTGAT CGAGTGGCCA TCGCGCAACA ACCGCAATCG TATCGCCGGT GTTTCGTCGT TCGGTGCGGC GGGGGTGAAT GCCCACGTTA TTCTGGAGGA GTACACAGCG CCGCAGGAAC AGGTCGTTGG CGCACCTGTC GGGCAAGAAC ATGTCCAGGC GTTGGTTTTC CCTTTCTCTT CGAATACCGA ACAAGGCCTG AAAAGAAACT GCCGTCGGTT CCTGGATTTC CTTCAGGCGC AAGCGCCTGA AGCCTCCACT GCAATGGATA TTGCGACGTT TATTCGCGCC ACGCTTCGGG GGCTGGATAA CAATCTCTCG TTGAATCAGG TTGACGATTC AACCCCCTTG GTCGATGCCG GGCTCAAACC ATTTGATTTC TATCGACTAT TCGAGGCCGT CAACACCCGC TACGGGCTGA ATCTGTCGAT GCTCAATTGG CAAGGCAGCG TATCGATTGG GCGACTGGTG GCGGTTATTC AGGGCGGCGC TTCATCGTCG ACCGTACCCG CGTTGCGTGA CGTCGCGTTC ACGCTGCAGA CGTGTCGAAA TGCCCATCAA CATCGCGTCG CGATTTGTGC CAGGGATCTA GCCGGTTTTA TCGAGCGTCT CCAGCGCTTC CTTGGCGAGG AAGACCCTCA GGTTAATGGT AGCGGCCTGT ATGCCGGGGT GAAAACTCAC CGGTTTGAAG AGCTTTCCAA GCAAAAAGCG CTGGCCCACG ACCGCGTTCA GATTGCTTTT GCCCACCACG AGTCGGACGC CTTGGCGCAA CTGTGGGTCA ATGGCAGCTT TGAGCAGTGG GAAGGTTTGT ACAGCGATGG GCTGCAACCG AAAAAATGCC GGATACCCGA GTATGCCTTT GCGGCCAACA CCCATAGCTT CCTGGACAAA GTCGGTTCGA ACGCAAGGGC TGTCAGACAC CTGGATCAGC CATCAGAAGC AGGGAAGGTG AGCGCCGAAA TCATCAGTCA CGTGCCCGTT CGCCTTGAAG TGCCGGCCGT TGCCGGATTC ATTCGAGAAA GACTGGCCCA TGTACTCAAG ATGGATGAGG CGTCGATCAA CAATGAGGTG TCGTTTGTCG ATTACGGTCT GGACTCCATT CTGGGCGTTG ATTTAATCCA TTCGCTTAAT GAACAGTATC GTCTCGGTTT GAAAACCACG TGTATCTACG ATTATCCGAA TGTCGAGGCT CTATCCCGCC ATGCCCATGG GCTGATTACG CCTGTGACGA TCGTCGACTC GTCGACTCAA TTCGCTCGGC CAGCGCCTCA GCTACTCAAC GAGTTGCCTG CAACTGGCCA GGAACGCAAC CAAAAGCCGA TTGCAATTAT CGGCATGAGT GGCCGTTTTG GCGGTGCCGA TGATACCGAG GCGTTCTGGA ACAATATCCG CGACGGCAAA GACAGCACCG AATCGGTGAA TCGTTGGGAC CTGGCGGACT ACCTCAATCA GGAAAAGTAT CGCGACGGTG TTTGCCAGCG CGGTGGATTC CTCAATGAAA TTGATAAGTT CGATGCGATC TTCTTCAACA TTTCCGGGGT TGAAGCCACG TATATGGACC CACAACAACG CCTTTTCCTC GAAGAGGCGT GGCATGCCCT GGAGGACAGT GGCTATGCAG GCAGTCGCCT GACCCCTGAA GTGAAAGATC AGTTCGGCAT TTACGTCGGC GGCTGGACTG GCGACTACAA CGAAGTGTTC GAGGCCAGTG AGGCACCGGC GCAAGCGCTG TGGGGCAACA TGGGCTCGAT GATTGCGTCG CGGATTGCCT ATTACCTGGA TTTCAAAGGG CCGGCGCTGA CCATCGACAC TGCGTGTTCA AGTTCGTTGG TGGCGATCCA TCAGGCTTGT AAAGACCTGC GACTGGGGAT CACCAATACG GCGATTGCGG GCGGTGTATT TGTACAGACG ACGCCGCGCT TGTACGTGCA GGCGACACAA GCCGGGATGT TGTCGCCCAC CGGGACGTGC TCGCCATTTG ATGAAAACGC CGATGGTTTT GTCCCCGGCG AAGCGGTCGG GGCGATTATT CTTAAACGTT TGGACGATGC CTTGGCCGAT GGCGACAACA TTCGCGCGGT CATCTACGGT GACGGCATCA ACCAGGACGG CAGAACCAAC GGCATCACGG CCCCAAGCGC CGTCTCGCAA GAGAAGTTGC TGAAACGGGT GTACAAGGAT TTCGGTATTA CCGCTAACGA CATCTCCATG GTGGAGGCCC ACGGCACCGG CACCAACCTG GGCGACCCGA TTGAGTTCAA CGCACTCTGT GCAGCCTTCA CCACGGACTC CGCGCACAAG AATTACTGCG CCTTGGGCTC GGTCAAAGCC AACATTGGCC ACACCCAATT TGCCGCCGGT ATCTCGAGTG TGATCAAGTC GGTGCTGGCA CTGGAACACA GCACCATTCC GCCGCTGATT CACCACACCA AAGGCAACTC GCGAATTGAT TTGGCCGGTA GCCCGTTTTA TGTCGCGAAA TCTTCACAAC CGTGGCAAGC CAGAAATGGC CGGAGGCTGG CAACGATCAG TGCCTTCGGT GCCAGTGGCA CCAATGCACA CGTGGTGCTC GGTGATTTAC CCCAGCCGGT ACGGCACACG GCGGAGAAGT TTGGGCCGCA GTTGATTCTG CTGTCGGCGA ACTCTGACCC ACAGTTGGTC AAACTCCTGC AGAAACTGCG TGAGCACCTC GAGTCTGACG CGACGGTGTC GCTGACCAAC ATCGCTTACA CCTTGGCCTG CGGGCGCAGG CACTTCGGCA AGCGCGTGGC GATTCTTAGC CGCTCGGTTT CTGAACTGGC CAATGCACTG GGCTCCCTGC TGTCAGCAGC CAAGCCGAGC ATGCAAATCT TTACGCCGAG CGACCTGGGG CAGGGCAATG CCCAGGCTTT GCTGAAACAA GCGCACGTCT ATATTGAAAA CGGCCAGGTC AACGACGCTT CGTTCCAGGG CAGCATTTGT AGCCTGCCGG CAAGTCCGTT CAATTCCATG TCGTTCTGGG CGTCTTCGAA GGATAAAGCG CCGGCGAAAC AGGCCTCCGT TGCACGTCCG AGTCCTCCCG CATCAGCCCC ACGAGCCACG GCGACAAGGT CAAAAGCCGC CAGCAAGTAC TGTGAATTCA CCCTGACGGT GGATGATTTC TTCATCGCGG ATCATTTGGT TATGGGGCAG AAAGTCCTGC CCGGCGTGAT GTATATCGAG CTGATGAAAC GCAGTGTTTG CGCGGTGTAT GGCGACAAGT TCAAGAATGC CTACCAAATA GCGCTGAACG ATATTGCCTG GGTTCAGCCG ATGGTCTTTA CCGACGCCAC GCCACGCTTA CCGATTATTG TGGAAGTGAC AGAGCGAGGC GACAACGCTG ACCTGAAGGT GCTGAGCCGA GATAAAAAGC AGCTGTATGC CCAAGCCATC TGTGAGTTGT CGTCAGGTCA ACAGGTGCTG GCAGAAGATC AGTCGTTCAG TCACCTGAAA GCACAGGGGA TCCGGTTCGA TGAGATTGAC CTGAGCGCGG CAGGGCTGGC CCAGTATCGA AAAGTACCGG CAGCGCAATG CTATGACTTG TTGCGTCGCC ATGGCATTAC CCACAAGACC CGTTTGCAAG GTATCAAGGC CCTCTACTTT TCGCCCTCGA CGGTCATCGC TCAATTGCAA CTGCCGTCGA TCCTGGCGAA TAAACAGTCG CCTTTTTCGG TTCATCCCTG CCTTGCAGAC TCTGCACTTC AGGCCATCTC GATTCTCGCT GTAGCGCGGG AAAAAGCCAA ACAAACCAGG GATCAGGGTG GGGTGCAAAC CCGGGTTCCT TTTGCAATAG ACCGCTTTCA ACAGTATCGG GAAATTCCAC TCAACGCCTG GTCGGTTGGG CATGTGCTGA ATGATGGCAA GAAAGAAATC TGGACCATTG TTATCTACGA CGCGCAATCC AATGTCTGTG CGGTGCTGGA TGGTTATCGC CAACGGATAC TGTCCGGTGT GCCGCGATTG TCTGAAGCTT AA
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Protein sequence | MNNSNEIANF QRYIIDQLKA GRITKEQAVQ ALAKTDATGG SMREEQSGPP GSTRYVPVWR DAPLGRALDV AQAHEQHCVV VVTEHGHERL VDTLKARLDQ RLLARMTVVL APEEAAAKGT LADQMSGLAS AMILDVFLSL KAQVTAILQH GKGRKSSADT LLQVFFLRPD SYAEDKVAHE SVYVGVEAAI SAMLKTLNKE HPSITTQLVA LDEASLGQLS QNSLAEEQHS HAAYVRYLKN VRYVQVFETL SDRSDGASLQ SFIKTDASYL IIGGVGGIGL HLADYILRQG QQARVVLTGR RSEADLQSNT PYLQLVNTYG KSRVSYLTAN AASYSDLKSL LIKVVASHHL EGIFHCAGTL NDSFLVNKTV EQFENTLEAK VSGSLHLIQA ANDVSQQTET GFDFILFCSS CAGQLGFVGQ IDYAAGNGFI DGFSDARNKV GRNGFDRLLS VNWPLWENAG MGVDQQALKE LHVEYGLLPL PVDVALNHVN TLLLAADTHH VLVTYGDPVK IDSQYVNAKP QRNLQTPALS QQTAQAASGK GAVTSVETAY DPLVAHLKQL ISSVLKLETS KLDTFEPLQS YGLDSFSIMR INQALSEHFS RLSKTLLYEV ESIHDLATTL SQLQPDAVQA WLGAVAPAAS QQAPQASARQ DAQPRPAVPR AVDAQAGDAV AIIGINAQFP GAANIEAFWE LLRNGVNAVT EIPESRWSLE DFYATDKIEA IRDGKSYCKQ GGFLEQAYDF DEQFFKLSPR EILAMDPQER LFMQSCWRAL EDSGYTKDKI KQQYDGDVGV YVGITKTGFN LYGPALWNQD ERTIPTTSFS SVASRISYLF DLNGPSMPID TMCSSSLVAI HEAVHSLKAG RCQMAIVGGV NLYLHPASYV QLCASSMLSQ KGQCHSFGDQ ADGFVPGEGV ATLILKPLRQ AQADGDRIYA TIKGSAVNHG GAAKGYTVPN PKAQTAVIEK ALNSANITAG ELSYIEAHGT GTELGDPIEL NALKACFSGN DLPESSCAIG SVKSNIGHLE AAAGLAGVIK VVLQMQHRVL VPSLHAQTIN PNLEFDQSPF YLQRELIEWP SRNNRNRIAG VSSFGAAGVN AHVILEEYTA PQEQVVGAPV GQEHVQALVF PFSSNTEQGL KRNCRRFLDF LQAQAPEAST AMDIATFIRA TLRGLDNNLS LNQVDDSTPL VDAGLKPFDF YRLFEAVNTR YGLNLSMLNW QGSVSIGRLV AVIQGGASSS TVPALRDVAF TLQTCRNAHQ HRVAICARDL AGFIERLQRF LGEEDPQVNG SGLYAGVKTH RFEELSKQKA LAHDRVQIAF AHHESDALAQ LWVNGSFEQW EGLYSDGLQP KKCRIPEYAF AANTHSFLDK VGSNARAVRH LDQPSEAGKV SAEIISHVPV RLEVPAVAGF IRERLAHVLK MDEASINNEV SFVDYGLDSI LGVDLIHSLN EQYRLGLKTT CIYDYPNVEA LSRHAHGLIT PVTIVDSSTQ FARPAPQLLN ELPATGQERN QKPIAIIGMS GRFGGADDTE AFWNNIRDGK DSTESVNRWD LADYLNQEKY RDGVCQRGGF LNEIDKFDAI FFNISGVEAT YMDPQQRLFL EEAWHALEDS GYAGSRLTPE VKDQFGIYVG GWTGDYNEVF EASEAPAQAL WGNMGSMIAS RIAYYLDFKG PALTIDTACS SSLVAIHQAC KDLRLGITNT AIAGGVFVQT TPRLYVQATQ AGMLSPTGTC SPFDENADGF VPGEAVGAII LKRLDDALAD GDNIRAVIYG DGINQDGRTN GITAPSAVSQ EKLLKRVYKD FGITANDISM VEAHGTGTNL GDPIEFNALC AAFTTDSAHK NYCALGSVKA NIGHTQFAAG ISSVIKSVLA LEHSTIPPLI HHTKGNSRID LAGSPFYVAK SSQPWQARNG RRLATISAFG ASGTNAHVVL GDLPQPVRHT AEKFGPQLIL LSANSDPQLV KLLQKLREHL ESDATVSLTN IAYTLACGRR HFGKRVAILS RSVSELANAL GSLLSAAKPS MQIFTPSDLG QGNAQALLKQ AHVYIENGQV NDASFQGSIC SLPASPFNSM SFWASSKDKA PAKQASVARP SPPASAPRAT ATRSKAASKY CEFTLTVDDF FIADHLVMGQ KVLPGVMYIE LMKRSVCAVY GDKFKNAYQI ALNDIAWVQP MVFTDATPRL PIIVEVTERG DNADLKVLSR DKKQLYAQAI CELSSGQQVL AEDQSFSHLK AQGIRFDEID LSAAGLAQYR KVPAAQCYDL LRRHGITHKT RLQGIKALYF SPSTVIAQLQ LPSILANKQS PFSVHPCLAD SALQAISILA VAREKAKQTR DQGGVQTRVP FAIDRFQQYR EIPLNAWSVG HVLNDGKKEI WTIVIYDAQS NVCAVLDGYR QRILSGVPRL SEA
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