Gene Psyr_4311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4311 
Symbol 
ID3369851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5137115 
End bp5140282 
Gene Length3168 bp 
Protein Length1055 aa 
Translation table11 
GC content52% 
IMG OID637654671 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_237379 
Protein GI66047538 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.707296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA GGACCGATGC GCTCGCCAGA GACACCGCCT CGCCGCTGAA CCAGGGGATG 
GTCTATCCCT TGCACAGGAT ATTTATGTTC GGCGGGCAGG GGTGTCATTA CTATCAGATG
GCGAGCCATC TATTCCTGAC GCATTCAACG TTTCGTGAAG CCATGCTGCG GCTGGATCTG
ATAGGCCAAC GCATACTGGG TAAATCGGTA ATCGCGGAGA TTTATCGTAA AGACAAGTCT
CGCAGCGATG ACTTCTCCTC TATCACGTTC ACTCATCCGA GCATCGTGAT GGTGCAACTG
GCACTGGTCT TAACCCTCGC TGCTGAAGGG ATCACCGCTG ACTCGGTGAT CGGCACGAGT
TTGGGGGAGT TCATTGCCGC TTGTGTTGCC GGTGCCATTT CGGATACGGA TTTATTGGCT
GCAATCTGTG ATCAAGCCTT ATTGATAGAG CAGTTTGCAG GACAAGGCAA GTTGCCGAAA
GGCGGCATGC TGTCGGCATT GATTACCCCG GATGAAAGGG ACGCACTGCT CGCCGAGTTT
CCTGAAGTTG CTGTTGCGGG TGTGCATCAC TCACGACACG TCACCTTTTC GGGAGATACG
TGGGTGATTG ATGCGTTGGA AAAGAGCTGC CAGCAACGAG CTTTTTTATA TCAGCGGATC
GCTGTGGACT ACGCCTTTCA TTCGCCTGCC ATACGCCCGT TAAAAGCGGC TTCTTTAGCG
TCGATAAAAA AGTACACAAC CGGGGCATTC ACGCTGCCTT TTTACTCCTG TGCAACGGTT
GCGCGGTGTC GTGTGATTGA CGCCGAGCAC TTTTGGGGGA TCGTTGAGTC ACCCATCAAC
TTTGCAGACA CCATCGACTT GATAGAGGCA AGCGCCACAG GCGCGACGCC TGTGTATGTT
GATCTTAGTC CTTCCGGATC GTTGCATGGA TTTGTCAAAC AGCATCTGGG TGCGTTCAGG
GCAAAGCAGG TCCCTGTGAG CCTGACGCTG ATGTCCTTGA TGAGTAACGA CACGACTCAA
TACCAGGCCG GCGTGCTGAC CCTAAAGCGC CTTGCAAAGG CGTATAGCGA AAGCGCTATC
GCTCAACCCG GGCCTCAAGA CACTACCTTG GTAAATCATT CTATGGAAAA GACTCGAACA
AGCGTGGTCG GCAATAATCC AGCAAAGAAC ACTGCCCTTG TTTTTCCAGG ACAGGCCTCA
CAGCGAGTGG GCATGGGGCG TGAATTGTTC CAACGTTTCC GTCGGCAGAC TGAAATCGCC
AGTGATATTC TGGGATATTC CATTGAGCAG CTGTGCCTGG AAGACCCACA GAAGCAGTTG
AACAAAACAC AGTACACGCA ACCTGCGCTG TATACCGTGT GTGCATTGCA GTACCTCGCC
TATCGGGAAG ATAACGAGGT GGTGATCAAG TTCCTGGCCG GGCACAGCCT GGGAGAATAT
GCGGCGCTGT TCGCCGCGGA TGTCTTTGAC TTTGAAGCGG GACTGCGCAT CGTCAAGCAC
CGCGGGGAAT TGATGTCTTC CGCGAATGCC GGTTCCATGG CCGTGATCCT GAATTATAAA
GCTCAGGATC TGCAGCAACT GCTCAACGAT AACGGCATTA CCAGCATTGA TGTTGCAAAC
ATCAACTCTC CGGATCAGTT GGTGATTGCA GGGCCGCATC AGGCGCTGGA GGCGTTTGAA
GGCATTATCA ACTCGCTGGC GGGCACCTAC ATTCCTATTC CGGTGGGGGC ACCTTTTCAT
TCGCGCTACA TGCAGCCGAT AGCACAAGAT TTTGAGCGGT TTCTCGAGCC TTTCACGTTT
CGACCGATGA ATAAAACGGT GATCAGTAAC GTCACCGGTT TGCCCCATCA GAATGAAACG
CTGAAGAGCC AACTGGTGAA GCAACTGTAC AGCCCAGTGC AGTGGTTGGA CAGCGTTCGT
TACTTGATGG GGTTGGAGGT CGATGAGTAC GTAGAGATCG GTCCTGGTGA TGTGCTCACC
AAGTTGACCA CCAAGATCCG CAATAAATGC TCGCCATTAG TCTTGGGTGA GAAAGTCATT
CGCCAGGTGC CAGGCAGCAC AGAGAGCGTG GAAAGCAAGG TTGCCCGGCA GCCTGCGAAA
GACGGGTTGG GTAAGGCTTT CAAAAGTCGC TGGAGCCGGG GGGATGAGTT TTCTAGTTAT
TTTGGCCTGG CTTACCCTCA TGTCCTGACG CTCTCGGAAG ATAATCTGGA TTATTCTTTT
ATAGAGCGTG CACAGGCGTG CGGACATCTA GCTTTTCAGG CAGTTCCTTG GACCGCTGAG
GCGATTGATT CCGGTAGCCT GGACAGCATT CTGTCGAGAT TGGGCGCCAA AAGATCCAAT
GACTCCGGGT GTGTGGGGGT GGCTATTACC CACAGTGAAA ACGATAAGGT TCTGTTTTCA
AAAATTCTGG CGCATCAGTT GAACGCTGTC GCCCTGACCG GCGTCTACGG TATGACGACT
GAACTGGTCT ACTACCGGGT TATTTCGGCC TACCAAGGGC GTTTTAGTAG TACCCCACAA
AAGAACAAGT TGTTTATCAG CGTGGATGAT CCTCGCTGTG TTCAGGGCTT TTACCAGAAG
CTACCGCAAG GTGTTCTTGA GCGTTTGCAC CTGCAAGGGC GAATTGATGC TGCTCAGTTT
GAGTTTGCGA AAAACATCGC TGCCTGTGAT GCCATTATTC TCAATAATGA AGAGCATGAC
CTGGAGGCAT TGATGGGCAT TAACCGGTTG AGGGTTGAAC ACCCTGAACT GGATATAAAG
ATTGGCATCG AAGGCGCGCT GTCGGCCCCG AACGACTTCA CTCAAGGGAC GCTCAGTCAA
ATAGATTTTT TTGTCAGCAG TGAGTTGAAC GTGCTGATAG GCGAGTCTTT TTTGCCTGGA
CTGATCAGGC AGACCCTTTT TTCCGCAAGC GACGCCTTTA TAGTGGATCT CCCAGATCCT
AAGACGATCC ATTTTGGTGG GCGAGCCAAG ACGTACATCA CTAATGATCC AGCGATTCGC
CAGCGTGCGG GTAACGCCCA TGGTTGGCTG TCGGATGATC AAAGGCCAAC GCTATGCAGG
TTGCTACCGT CCAACTATCT GGCCATTTCC GAATGGCTCA AGGTTCAGTT CGTCAATAAA
CAGCCCTCGT TGGCTGAGTT AAGCTCGGCT CTTTTGAATG GCGTATAG
 
Protein sequence
MNVRTDALAR DTASPLNQGM VYPLHRIFMF GGQGCHYYQM ASHLFLTHST FREAMLRLDL 
IGQRILGKSV IAEIYRKDKS RSDDFSSITF THPSIVMVQL ALVLTLAAEG ITADSVIGTS
LGEFIAACVA GAISDTDLLA AICDQALLIE QFAGQGKLPK GGMLSALITP DERDALLAEF
PEVAVAGVHH SRHVTFSGDT WVIDALEKSC QQRAFLYQRI AVDYAFHSPA IRPLKAASLA
SIKKYTTGAF TLPFYSCATV ARCRVIDAEH FWGIVESPIN FADTIDLIEA SATGATPVYV
DLSPSGSLHG FVKQHLGAFR AKQVPVSLTL MSLMSNDTTQ YQAGVLTLKR LAKAYSESAI
AQPGPQDTTL VNHSMEKTRT SVVGNNPAKN TALVFPGQAS QRVGMGRELF QRFRRQTEIA
SDILGYSIEQ LCLEDPQKQL NKTQYTQPAL YTVCALQYLA YREDNEVVIK FLAGHSLGEY
AALFAADVFD FEAGLRIVKH RGELMSSANA GSMAVILNYK AQDLQQLLND NGITSIDVAN
INSPDQLVIA GPHQALEAFE GIINSLAGTY IPIPVGAPFH SRYMQPIAQD FERFLEPFTF
RPMNKTVISN VTGLPHQNET LKSQLVKQLY SPVQWLDSVR YLMGLEVDEY VEIGPGDVLT
KLTTKIRNKC SPLVLGEKVI RQVPGSTESV ESKVARQPAK DGLGKAFKSR WSRGDEFSSY
FGLAYPHVLT LSEDNLDYSF IERAQACGHL AFQAVPWTAE AIDSGSLDSI LSRLGAKRSN
DSGCVGVAIT HSENDKVLFS KILAHQLNAV ALTGVYGMTT ELVYYRVISA YQGRFSSTPQ
KNKLFISVDD PRCVQGFYQK LPQGVLERLH LQGRIDAAQF EFAKNIAACD AIILNNEEHD
LEALMGINRL RVEHPELDIK IGIEGALSAP NDFTQGTLSQ IDFFVSSELN VLIGESFLPG
LIRQTLFSAS DAFIVDLPDP KTIHFGGRAK TYITNDPAIR QRAGNAHGWL SDDQRPTLCR
LLPSNYLAIS EWLKVQFVNK QPSLAELSSA LLNGV