Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_4311 |
Symbol | |
ID | 3369851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 5137115 |
End bp | 5140282 |
Gene Length | 3168 bp |
Protein Length | 1055 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637654671 |
Product | malonyl CoA-acyl carrier protein transacylase |
Protein accession | YP_237379 |
Protein GI | 66047538 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.707296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATGTCA GGACCGATGC GCTCGCCAGA GACACCGCCT CGCCGCTGAA CCAGGGGATG GTCTATCCCT TGCACAGGAT ATTTATGTTC GGCGGGCAGG GGTGTCATTA CTATCAGATG GCGAGCCATC TATTCCTGAC GCATTCAACG TTTCGTGAAG CCATGCTGCG GCTGGATCTG ATAGGCCAAC GCATACTGGG TAAATCGGTA ATCGCGGAGA TTTATCGTAA AGACAAGTCT CGCAGCGATG ACTTCTCCTC TATCACGTTC ACTCATCCGA GCATCGTGAT GGTGCAACTG GCACTGGTCT TAACCCTCGC TGCTGAAGGG ATCACCGCTG ACTCGGTGAT CGGCACGAGT TTGGGGGAGT TCATTGCCGC TTGTGTTGCC GGTGCCATTT CGGATACGGA TTTATTGGCT GCAATCTGTG ATCAAGCCTT ATTGATAGAG CAGTTTGCAG GACAAGGCAA GTTGCCGAAA GGCGGCATGC TGTCGGCATT GATTACCCCG GATGAAAGGG ACGCACTGCT CGCCGAGTTT CCTGAAGTTG CTGTTGCGGG TGTGCATCAC TCACGACACG TCACCTTTTC GGGAGATACG TGGGTGATTG ATGCGTTGGA AAAGAGCTGC CAGCAACGAG CTTTTTTATA TCAGCGGATC GCTGTGGACT ACGCCTTTCA TTCGCCTGCC ATACGCCCGT TAAAAGCGGC TTCTTTAGCG TCGATAAAAA AGTACACAAC CGGGGCATTC ACGCTGCCTT TTTACTCCTG TGCAACGGTT GCGCGGTGTC GTGTGATTGA CGCCGAGCAC TTTTGGGGGA TCGTTGAGTC ACCCATCAAC TTTGCAGACA CCATCGACTT GATAGAGGCA AGCGCCACAG GCGCGACGCC TGTGTATGTT GATCTTAGTC CTTCCGGATC GTTGCATGGA TTTGTCAAAC AGCATCTGGG TGCGTTCAGG GCAAAGCAGG TCCCTGTGAG CCTGACGCTG ATGTCCTTGA TGAGTAACGA CACGACTCAA TACCAGGCCG GCGTGCTGAC CCTAAAGCGC CTTGCAAAGG CGTATAGCGA AAGCGCTATC GCTCAACCCG GGCCTCAAGA CACTACCTTG GTAAATCATT CTATGGAAAA GACTCGAACA AGCGTGGTCG GCAATAATCC AGCAAAGAAC ACTGCCCTTG TTTTTCCAGG ACAGGCCTCA CAGCGAGTGG GCATGGGGCG TGAATTGTTC CAACGTTTCC GTCGGCAGAC TGAAATCGCC AGTGATATTC TGGGATATTC CATTGAGCAG CTGTGCCTGG AAGACCCACA GAAGCAGTTG AACAAAACAC AGTACACGCA ACCTGCGCTG TATACCGTGT GTGCATTGCA GTACCTCGCC TATCGGGAAG ATAACGAGGT GGTGATCAAG TTCCTGGCCG GGCACAGCCT GGGAGAATAT GCGGCGCTGT TCGCCGCGGA TGTCTTTGAC TTTGAAGCGG GACTGCGCAT CGTCAAGCAC CGCGGGGAAT TGATGTCTTC CGCGAATGCC GGTTCCATGG CCGTGATCCT GAATTATAAA GCTCAGGATC TGCAGCAACT GCTCAACGAT AACGGCATTA CCAGCATTGA TGTTGCAAAC ATCAACTCTC CGGATCAGTT GGTGATTGCA GGGCCGCATC AGGCGCTGGA GGCGTTTGAA GGCATTATCA ACTCGCTGGC GGGCACCTAC ATTCCTATTC CGGTGGGGGC ACCTTTTCAT TCGCGCTACA TGCAGCCGAT AGCACAAGAT TTTGAGCGGT TTCTCGAGCC TTTCACGTTT CGACCGATGA ATAAAACGGT GATCAGTAAC GTCACCGGTT TGCCCCATCA GAATGAAACG CTGAAGAGCC AACTGGTGAA GCAACTGTAC AGCCCAGTGC AGTGGTTGGA CAGCGTTCGT TACTTGATGG GGTTGGAGGT CGATGAGTAC GTAGAGATCG GTCCTGGTGA TGTGCTCACC AAGTTGACCA CCAAGATCCG CAATAAATGC TCGCCATTAG TCTTGGGTGA GAAAGTCATT CGCCAGGTGC CAGGCAGCAC AGAGAGCGTG GAAAGCAAGG TTGCCCGGCA GCCTGCGAAA GACGGGTTGG GTAAGGCTTT CAAAAGTCGC TGGAGCCGGG GGGATGAGTT TTCTAGTTAT TTTGGCCTGG CTTACCCTCA TGTCCTGACG CTCTCGGAAG ATAATCTGGA TTATTCTTTT ATAGAGCGTG CACAGGCGTG CGGACATCTA GCTTTTCAGG CAGTTCCTTG GACCGCTGAG GCGATTGATT CCGGTAGCCT GGACAGCATT CTGTCGAGAT TGGGCGCCAA AAGATCCAAT GACTCCGGGT GTGTGGGGGT GGCTATTACC CACAGTGAAA ACGATAAGGT TCTGTTTTCA AAAATTCTGG CGCATCAGTT GAACGCTGTC GCCCTGACCG GCGTCTACGG TATGACGACT GAACTGGTCT ACTACCGGGT TATTTCGGCC TACCAAGGGC GTTTTAGTAG TACCCCACAA AAGAACAAGT TGTTTATCAG CGTGGATGAT CCTCGCTGTG TTCAGGGCTT TTACCAGAAG CTACCGCAAG GTGTTCTTGA GCGTTTGCAC CTGCAAGGGC GAATTGATGC TGCTCAGTTT GAGTTTGCGA AAAACATCGC TGCCTGTGAT GCCATTATTC TCAATAATGA AGAGCATGAC CTGGAGGCAT TGATGGGCAT TAACCGGTTG AGGGTTGAAC ACCCTGAACT GGATATAAAG ATTGGCATCG AAGGCGCGCT GTCGGCCCCG AACGACTTCA CTCAAGGGAC GCTCAGTCAA ATAGATTTTT TTGTCAGCAG TGAGTTGAAC GTGCTGATAG GCGAGTCTTT TTTGCCTGGA CTGATCAGGC AGACCCTTTT TTCCGCAAGC GACGCCTTTA TAGTGGATCT CCCAGATCCT AAGACGATCC ATTTTGGTGG GCGAGCCAAG ACGTACATCA CTAATGATCC AGCGATTCGC CAGCGTGCGG GTAACGCCCA TGGTTGGCTG TCGGATGATC AAAGGCCAAC GCTATGCAGG TTGCTACCGT CCAACTATCT GGCCATTTCC GAATGGCTCA AGGTTCAGTT CGTCAATAAA CAGCCCTCGT TGGCTGAGTT AAGCTCGGCT CTTTTGAATG GCGTATAG
|
Protein sequence | MNVRTDALAR DTASPLNQGM VYPLHRIFMF GGQGCHYYQM ASHLFLTHST FREAMLRLDL IGQRILGKSV IAEIYRKDKS RSDDFSSITF THPSIVMVQL ALVLTLAAEG ITADSVIGTS LGEFIAACVA GAISDTDLLA AICDQALLIE QFAGQGKLPK GGMLSALITP DERDALLAEF PEVAVAGVHH SRHVTFSGDT WVIDALEKSC QQRAFLYQRI AVDYAFHSPA IRPLKAASLA SIKKYTTGAF TLPFYSCATV ARCRVIDAEH FWGIVESPIN FADTIDLIEA SATGATPVYV DLSPSGSLHG FVKQHLGAFR AKQVPVSLTL MSLMSNDTTQ YQAGVLTLKR LAKAYSESAI AQPGPQDTTL VNHSMEKTRT SVVGNNPAKN TALVFPGQAS QRVGMGRELF QRFRRQTEIA SDILGYSIEQ LCLEDPQKQL NKTQYTQPAL YTVCALQYLA YREDNEVVIK FLAGHSLGEY AALFAADVFD FEAGLRIVKH RGELMSSANA GSMAVILNYK AQDLQQLLND NGITSIDVAN INSPDQLVIA GPHQALEAFE GIINSLAGTY IPIPVGAPFH SRYMQPIAQD FERFLEPFTF RPMNKTVISN VTGLPHQNET LKSQLVKQLY SPVQWLDSVR YLMGLEVDEY VEIGPGDVLT KLTTKIRNKC SPLVLGEKVI RQVPGSTESV ESKVARQPAK DGLGKAFKSR WSRGDEFSSY FGLAYPHVLT LSEDNLDYSF IERAQACGHL AFQAVPWTAE AIDSGSLDSI LSRLGAKRSN DSGCVGVAIT HSENDKVLFS KILAHQLNAV ALTGVYGMTT ELVYYRVISA YQGRFSSTPQ KNKLFISVDD PRCVQGFYQK LPQGVLERLH LQGRIDAAQF EFAKNIAACD AIILNNEEHD LEALMGINRL RVEHPELDIK IGIEGALSAP NDFTQGTLSQ IDFFVSSELN VLIGESFLPG LIRQTLFSAS DAFIVDLPDP KTIHFGGRAK TYITNDPAIR QRAGNAHGWL SDDQRPTLCR LLPSNYLAIS EWLKVQFVNK QPSLAELSSA LLNGV
|
| |