Gene Psyr_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_4298 
Symbol 
ID3369838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp5125227 
End bp5126141 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content64% 
IMG OID637654658 
Producthypothetical protein 
Protein accessionYP_237366 
Protein GI66047525 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.528973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.530004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGT CCGTCCGTGT TTCACCCTTG CTCATCGGTG CCTTTCTGGC CTTGTACCTG 
ATCTGGGGCT CTACCTATCT GGTGATCCGC ATCGGCGTGG AATCATGGCC GCCGTTGATG
ATGGCGGGTG TGCGCTTTCT GATTGCCGGC TGCCTGATGT ATGGCTTTCT GCGGTTTCGC
GGCGTGCCTG CGCCGACCTG GCGCGAGTGG AAAGCCGCGT TCGTGATCGG CTTCCTGCTG
CTGGCCTGCG GTAATGGCGG TGTCACCCTG GCCGAACACG CAGGCGTCGC ATCAGGCGTT
GCCGCGTTGG CGGTGGCGAC CATGCCGCTG TTTACCCTGC TGTTCGGCCT GTTCTGGGGC
AATCGCACCA CGAATCTTGA ATGGGCAGGC ATCGTGCTGG GCCTGATCGG CATCGGCCTG
CTGAACCTCG GCTCCAATTT GCAGGCCAGC CCTTATGGCG CCGCCGTGGT GATCTTTGCC
GCCGCAGCCT GGGCGTTCGG TTCGGTGCTG AGCAAGCACC TGCCGTTGCC GAAGGGTCCG
ATGGCCAGTG CGGCGGAAAT GATCACGGCG GGGGCGACGC TGCTGATCGG CAGTGCCTTG
AGTGGCGAGC GTCTGGCGCA TATGCCGACG GCGGCGGGCT GGGGCGCGCT GCTGTATCTG
GTGGTATTCG GCTCTATCGT CGCGTTCAGC GCCTATATGT ACCTGCTCAA GAACGTGCGC
CCGGCAGCGG CGACCAGCTA CGCCTACGTC AATCCGGCCG TGGCAGTGAT GCTCGGCGTG
GTGTTCGCTG GCGAAACGAT CGGTGTCGAA GAGTGCATGG CCATGGTGGT GATCATCAGT
GCCGTGGTGC TGATTGGCCT GCCGCAATGG CGCCGGTCGC CGCCGCCAGA GGTCGCATCG
ACACGCACAA GCTAA
 
Protein sequence
MPQSVRVSPL LIGAFLALYL IWGSTYLVIR IGVESWPPLM MAGVRFLIAG CLMYGFLRFR 
GVPAPTWREW KAAFVIGFLL LACGNGGVTL AEHAGVASGV AALAVATMPL FTLLFGLFWG
NRTTNLEWAG IVLGLIGIGL LNLGSNLQAS PYGAAVVIFA AAAWAFGSVL SKHLPLPKGP
MASAAEMITA GATLLIGSAL SGERLAHMPT AAGWGALLYL VVFGSIVAFS AYMYLLKNVR
PAAATSYAYV NPAVAVMLGV VFAGETIGVE ECMAMVVIIS AVVLIGLPQW RRSPPPEVAS
TRTS